Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1070 ATGGCTTTGAACAATGGTATCCCCGCCACCGGCACCGGTCTCATCGTCAGCTTCGGTGAGATGCTCATCGACTTCGTCCCAACCGTCTCTGGTGTCTCCCTAGCTGAGGCACCGGGATTCCTTAAAGCCCCCGGCGGTGCTCCGGCTAACGTGGCCATCGCCGTCGCAAGGATAGGCGGAAAAGCCGCCTTCGTCGGAAAACTAGGAGATGATGAGTTCGGTCACATGCTGGCGGGGATCTTGAAGGAAAACGGCGTACGCGCCGATGGTATAACATTTGATACGGGTGCACGTACTGCTTTGGCGTTCGTGACTCTACGCGCTGATGGGGAGCGTGAGTTTATGTTTTATAGGAACCCGAGTGCTGATATGTTGCTTAGGCCAGAAGAACTCAACCTTGAACTCATCAGATCTGCAAAAGTTTTCCACTATGGATCAATAAGTTTGATAGTGGAGCCATGCAGATCAGCACACTTGAAAGCCATGGAAGTTGCCAAAGAAGCTGGTTGTCTTCTGTCCTATGATCCAAACCTGCGCCTACCATTGTGGCCATCACCTGAAGAAGCTCGTCAACAAATTCTCAGTATATGGGAAAAAGCTGATTTAATCAAGGTCAGTGATGTGGAGCTTGAATTCCTTACTGGAAGTGACAAAATTGATGATGCTTCTGCTTTGTCTTTGTGGCACCCCAACTTGAAGTTACTCCTTGTCACTGTTGGTGAACATGGTTCTAAATACTATACCAAGAATTTCCATGGATCAGTAGATGCTTTCCATGTCAAGACAGTTGATACAACAGGAGCTGGTGATTCCTTTGTTGGTTCTCTATTGGCCAAGATTGTTGATGATCAATCCATACTTGAAGATGAACCAAGGTTAAGAGAGGTACTCAAATTTGCAAATGCATGTGGAGCAATTACAACTACTAAAAAGGGAGCAATCCCTGCTCTTCCCAAAGAGGAAGATGTGCTCAACCTGATCAAAGAGTCAGCATAA 996 0.4709 MALNNGIPATGTGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARIGGKAAFVGKLGDDEFGHMLAGILKENGVRADGITFDTGARTALAFVTLRADGEREFMFYRNPSADMLLRPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGCLLSYDPNLRLPLWPSPEEARQQILSIWEKADLIKVSDVELEFLTGSDKIDDASALSLWHPNLKLLLVTVGEHGSKYYTKNFHGSVDAFHVKTVDTTGAGDSFVGSLLAKIVDDQSILEDEPRLREVLKFANACGAITTTKKGAIPALPKEEDVLNLIKESA 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1070 331 Gene3D - 13 331 IPR029056 -
Lal10g1070 331 PANTHER BNAA04G18320D PROTEIN 20 324 - -
Lal10g1070 331 SUPERFAMILY Ribokinase-like 15 327 IPR029056 -
Lal10g1070 331 PANTHER HEXOKINASE FAMILY MEMBER 20 324 - -
Lal10g1070 331 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Lal10g1070 331 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Lal10g1070 331 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Lal10g1070 331 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Lal10g1070 331 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Lal10g1070 331 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1070 Lal-Chr10 17683898 17688184 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1070 K00847 - gmx:100803713 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1070 10 17683898 17688184 Lal1g0278 1 1629059 1632925 PCT
Lal10g1070 10 17683898 17688184 Lal2g0175 2 1041723 1045638 PCT
Lal1g0278 1 1629059 1632925 Lal10g1070 10 17683898 17688184 PCT
Lal2g0175 2 1041723 1045638 Lal10g1070 10 17683898 17688184 PCT