Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g0171 ATGGGTAGCACATTCAATCCACAGATTTTAATGGAAAAACTAGCCAAGCTGAATAGTTCGCAGACGAGTATAGAGACTTTGTCACATTGGTGCATTTTTCATATGAATAAATGCAAACAAGTTGTTGAAACATGGGCAAGACAATTTCATTGTTCTCCTCGTGAGAAGAGATTAACATTTCTGTATCTTGCAAATGATATTCTACAGAACAGCAGGAGAAAGGGTTCTGAATTTGTTGGTGAGTTCTGGAAGGTTCTTCCTGATGCTCTTCGAGATGTGATTGCAAATGGTGATGAGTTTGCGAGGAATGCTGCACTCCGTCTGATTGGTATATGGGAAGAAAGAAAAGTTTTTGGTTCTCGCGGTCAACTTCTCAAGGAAGAGTTTGTTGGGAGGCATGTGGAAAATAACAGCCGTGATGTGAAACCGATGAGCATGAAACTGAGGCCATCTGCTGGGAATGCATTAGAGAAAATAGTTTCCGGTTATCATGTTATTTATGGAGGGCAGACAGATGAAGATGCTGTATTGAGTAAATGCCAGAATGCCATTAGCTGTCTTGAAAAAGCAGATAAGGAAATAGGTCATGATAGTAATTCAGGGCAATTCCATGGACCTGCACTTGTGGATGAACTGCAGGGGCACAATTCCGTACTTCGGGAATGCATTGAGCAATTAACTGCAATAGAATCATCAAGAGATACCCTTGTGTCTCACCTGAGAGAGGCTCTCCAAAATCAGGAAATCAAGCTTGGTCAGGTCCGTAGCCAGATTCAGGCGGCACGTGTTCAGTCGGAACAGGCAGGTAATACCTGCCGACAACTACTGAATGTCAACAATATTCAATCATTAGCTGAACCGGGCTCCAAGGAAATTCGAACCTCCTTGTCATCTGGAAGTTTTATTTCGGATGATCGGGAGCAATCAGTTCCGTTAATGTACACACCACAGGCATCTTTTCCTCAAAAATCTGGACATATCGAGGAAGATCCACGCAAGTCTGCAGCTGCTGCAGTGGCAGCGAAACTGACTGCTTCAACTTCATCTGCGCAGATGCTGTCTTATGTGCTATCCTCCCTAGCATCTGAAGGTGTTATCGGCAGCGATCCGACGAAAGAGTCTTCCGCTGATTATCATTCTGAGAAGAGGATCAAACTTGAAAATGACCAGTCATCTTATCTACCAACTCAACAACCTCAACAACCACTCCCTTCCTTTTCACTTCCTGAATCTATTCAACACAATGGATCTTCCACCAACTGGCAATCTACTCCCAACGAACTTCCACCTCTACCATCATCGTCACCTCCCCCATTGCCGCCACCACCACCAATGCCGCAGCAGTACCCAGTGCCACAGTTCATGCAGACTGCTGGATCATTTAGCAGTATGGCATACAGCTATGGCGTGGCGCAACAGTCATCAATGCAAGCCTATCCATCTGTCGGGGCTTCGCTCAATGGCGTCTCCCTTTACGCTCCTCTTATGAGTGCATATCCGGGTTTTCAGGGTTCAGATGGAAATTACTATAACCAGCCCTCATCAATGCCTATGACCCCGATGTCCCGACAGTAA 1575 0.4521 MGSTFNPQILMEKLAKLNSSQTSIETLSHWCIFHMNKCKQVVETWARQFHCSPREKRLTFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIANGDEFARNAALRLIGIWEERKVFGSRGQLLKEEFVGRHVENNSRDVKPMSMKLRPSAGNALEKIVSGYHVIYGGQTDEDAVLSKCQNAISCLEKADKEIGHDSNSGQFHGPALVDELQGHNSVLRECIEQLTAIESSRDTLVSHLREALQNQEIKLGQVRSQIQAARVQSEQAGNTCRQLLNVNNIQSLAEPGSKEIRTSLSSGSFISDDREQSVPLMYTPQASFPQKSGHIEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGSDPTKESSADYHSEKRIKLENDQSSYLPTQQPQQPLPSFSLPESIQHNGSSTNWQSTPNELPPLPSSSPPPLPPPPPMPQQYPVPQFMQTAGSFSSMAYSYGVAQQSSMQAYPSVGASLNGVSLYAPLMSAYPGFQGSDGNYYNQPSSMPMTPMSRQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g0171 524 Coils Coil 244 264 - -
Lal10g0171 524 MobiDBLite consensus disorder prediction 389 428 - -
Lal10g0171 524 PANTHER OS01G0925000 PROTEIN 1 524 - -
Lal10g0171 524 MobiDBLite consensus disorder prediction 389 446 - -
Lal10g0171 524 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 524 - -
Lal10g0171 524 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Lal10g0171 524 Gene3D - 2 129 IPR008942 -
Lal10g0171 524 Pfam CID domain 9 120 IPR006569 -
Lal10g0171 524 SUPERFAMILY ENTH/VHS domain 13 117 IPR008942 -
Lal10g0171 524 SMART 558neu5 9 130 IPR006569 -
Lal10g0171 524 MobiDBLite consensus disorder prediction 429 446 - -
Lal10g0171 524 CDD CID_RPRD_like 7 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g0171 Lal-Chr10 1983461 1991342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g0171 K15559 - gmx:100806108 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g0171 10 1983461 1991342 Lal10g0171 10 1983461 1991342 ECH
Lal10g0171 10 1983461 1991342 Lal25g1172 25 15169641 15177869 ECH