Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0405 ATGTATCCCTCTGAACGCACATATACACATGTTGATACTTCAACACCTCCAACCTTAGCTACTATGGACCAATTCCTTAAAGGAGGAGAATCACCAATCTATTCTCCCAACAACTCAAAATCTCCATCTTTGGAGAGGATGAAGCAGCATGACCCAGAAGAAGATGAAGTTCTCTATCAAAAGAAATCATCATCAGTTCTTGTTAAAATGAGGGAAGGAGTAAAGAGACTAAGAAACAGCTTCAGAATGAGAAAACAAGAGGAAGAGGGAAATGTCACTCCATCATGGGGTGTTAGGTTAGAAGATTATATGGAGGAAGAAGATGTTGAATACCTTGGAGCTCCAATGTATGAGTCAGAGGTGGCACCTGAAGGATACAAAGAAAATGCAAGACAGCATCCAAGAGCAAATCCAGTAATATCTGAGAAGCATGTTTTGCATAGCCCTACCAAAGAAAAACAGCATAGTCTTGTTAATTCCACCACTACAACACAACCTGCAACCACTACTACTACTTTCATGTCATGA 528 0.4015 MYPSERTYTHVDTSTPPTLATMDQFLKGGESPIYSPNNSKSPSLERMKQHDPEEDEVLYQKKSSSVLVKMREGVKRLRNSFRMRKQEEEGNVTPSWGVRLEDYMEEEDVEYLGAPMYESEVAPEGYKENARQHPRANPVISEKHVLHSPTKEKQHSLVNSTTTTQPATTTTTFMS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0405 175 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 24 173 IPR037491 GO:0009737
Lal25g0405 175 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 24 173 - -
Lal25g0405 175 MobiDBLite consensus disorder prediction 143 175 - -
Lal25g0405 175 MobiDBLite consensus disorder prediction 152 175 - -
Lal25g0405 175 MobiDBLite consensus disorder prediction 27 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0405 Lal-Chr25 2750863 2751851 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0405 - - lang:109342959 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0405 25 2750863 2751851 Lal10g1042 10 17502517 17507608 LSH
Lal25g0405 25 2750863 2751851 Lal1g0311 1 1883232 1892017 PCT
Lal25g0405 25 2750863 2751851 Lal2g0211 2 1246083 1248057 PCT
Lal1g0311 1 1883232 1892017 Lal25g0405 25 2750863 2751851 PCT
Lal2g0211 2 1246083 1248057 Lal25g0405 25 2750863 2751851 PCT