Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1042 ATGCAATCCAGAGAATTAGTCATAAAAATGTCTCCCCCTGAACGCACGTACAGACATGTTGATACTTCAAGACCTACTATGGACCAATTCCTAAGAGGAGGAGAATCTGCTAAGATGTCACCAACCTATTCTCCCAACTACTCTAAATCCCCCTCCTCTCCTTACTCTGAGAGGTTGAAGCACCATGACCCAGAAGAAGACCAAGGCCTCTATCAGAAGAAATCATCAGTTCTTGTGAAAATGAGAGAAGGGGTTAAGAGACTACGCAATAGCTTCAGAATTAGGAAACAGGAGGAAGATGGAAACCTCACTCCATCATGGGGTGTTAGCTTAGAAGATTATGAGGAAGAAGAAGATGCTGAATACCTTGGAGCTCCGATGTATGAATCAGAGCTAGCACCTGAGGGATACAAAGAAAATGCAAGACAACATCCAAGAGCAAATCCAGTAATATCTGAGAAGCATGTTTTGCATAGCCCTGTCAAATCCAGTGTGGAACAAGATCAAGAAAAACAACCTAGCATTGTCAAGTCCACCACAACAACTCAACCTTCAACTACTACTACTCATCATGGTCCAAACATGAAAATGACTGAAAAAAACTTAGCTGAGAAACTTTCACCAGCCTATGAAGAAGCATCACATTCAGATGCAGCAAATTCTATATCCTCCAAAATTCAAGGCCTTTCTGTTTCTAGAACTACTACTGCCAAAATGTCTTCACAAACTTCTTCAATTGCCCCACCAACTCCATCTATTACATCAGCTCCATTGTCTAGACAAACTTCATTATCCACATCACCCTCAATAAATGGGAGATATACTATTAGCCCAAAGGGTGCTTCAGTGAAAGAGTATTTGAAGATTAAATTTGAGCCAGGGAATGATGAGAAAGTTCTGTCTGAAGTGATATATGAAGCAATGAGTCCTAGGAGAACAACTACTACTAGTGATGCAGGTGTAATTGATAAGGTGAGAGAAGCTGTGAATTCTTTGCTACATAATGAAGAACCATCACAACAATATGGAAACAAAACTACTTCATCTCAAACCCCAGCAATAGTATCAACCAACAACCTTAGAGAAGAATTCATAACCGACCTTAGCTCAGTTGGTAGAGCGGAGGACTGTAGTAAGTTAAATGTCTAA 1149 0.4038 MQSRELVIKMSPPERTYRHVDTSRPTMDQFLRGGESAKMSPTYSPNYSKSPSSPYSERLKHHDPEEDQGLYQKKSSVLVKMREGVKRLRNSFRIRKQEEDGNLTPSWGVSLEDYEEEEDAEYLGAPMYESELAPEGYKENARQHPRANPVISEKHVLHSPVKSSVEQDQEKQPSIVKSTTTTQPSTTTTHHGPNMKMTEKNLAEKLSPAYEEASHSDAANSISSKIQGLSVSRTTTAKMSSQTSSIAPPTPSITSAPLSRQTSLSTSPSINGRYTISPKGASVKEYLKIKFEPGNDEKVLSEVIYEAMSPRRTTTTSDAGVIDKVREAVNSLLHNEEPSQQYGNKTTSSQTPAIVSTNNLREEFITDLSSVGRAEDCSKLNV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1042 382 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 23 252 IPR037491 GO:0009737
Lal10g1042 382 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 259 350 IPR037491 GO:0009737
Lal10g1042 382 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 23 252 - -
Lal10g1042 382 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 259 350 - -
Lal10g1042 382 MobiDBLite consensus disorder prediction 1 73 - -
Lal10g1042 382 MobiDBLite consensus disorder prediction 233 271 - -
Lal10g1042 382 MobiDBLite consensus disorder prediction 156 197 - -
Lal10g1042 382 MobiDBLite consensus disorder prediction 39 54 - -
Lal10g1042 382 MobiDBLite consensus disorder prediction 55 70 - -
Lal10g1042 382 MobiDBLite consensus disorder prediction 166 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1042 Lal-Chr10 17502517 17507608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1042 - - lang:109342959 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0405 25 2750863 2751851 Lal10g1042 10 17502517 17507608 LSH
Lal10g1042 10 17502517 17507608 Lal1g0311 1 1883232 1892017 PCT
Lal10g1042 10 17502517 17507608 Lal2g0211 2 1246083 1248057 PCT
Lal1g0311 1 1883232 1892017 Lal10g1042 10 17502517 17507608 PCT
Lal2g0211 2 1246083 1248057 Lal10g1042 10 17502517 17507608 PCT