Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0307 ATGGAGAGAAACCATTCCCACAGGCAAGTTGCTGCAATGAAACAGTCCCTCTTTGATCAGGGTCATTTGGATGAGCAATTTATCCAACTTGAAGAATTGCAAGATGATGCTAACCCTAACTTTGTTGAGGAAATTGTAACTCTTTACTACCATGATTCAACCAGGCTTATATCAAACATGGAGCAGACACTGGAGAGGAACCCATTGGATTTCAACAAGCTAGACAATATTATGCATCAATTCAAAGGAAGTAGCTCAAGCATTGGTGCCAAAAAGGTGAAAACAGAATGCACTTTATTTAGGGAATATTGCAGGACAGGAAATGCAGAAGGATGCAGGAAGAGCTTCCAACAACTGAAGAAAGAATATGCAGCATTGAGAAAGAAATTTGAAGCTTATTTTCAGATGGCTAGGCAAGTTGGACCCTTGGAGAGTGCATGTTGCCCTAGGTAA 453 0.4062 MERNHSHRQVAAMKQSLFDQGHLDEQFIQLEELQDDANPNFVEEIVTLYYHDSTRLISNMEQTLERNPLDFNKLDNIMHQFKGSSSSIGAKKVKTECTLFREYCRTGNAEGCRKSFQQLKKEYAALRKKFEAYFQMARQVGPLESACCPR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0307 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Lal25g0307 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Lal25g0307 150 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 3 146 - -
Lal25g0307 150 PANTHER - 3 146 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lal25g0307 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
Lal25g0307 150 Coils Coil 109 129 - -
Lal25g0307 150 Gene3D HPT domain 1 146 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0307 Lal-Chr25 2104236 2107477 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0307 K14490 - gmx:100526849 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0307 25 2104236 2107477 Lal25g0307 25 2104236 2107477 ECH
Lal25g0307 25 2104236 2107477 Lal17g0330 17 2095634 2098777 ECH
Lal25g0307 25 2104236 2107477 Lal20g1146 20 15887943 15889108 PCT
Lal20g1146 20 15887943 15889108 Lal25g0307 25 2104236 2107477 PCT