Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal17g0330 ATGGACAAAACACGTTTGCAACAACAAGCTTTCTTCATGCGAAACTCACTCTTTGAACAGGGTTTCCTTGACGAGCAATTCATTCAGCTAGAGGAATTGCAAGACGATGTTAATCCTAATTTTGTGGAAGAAATTGTGATTCTTTTCTACAGTGATTCTGTCAGATTGGTCTACAAGATAGAACAAGCACTGATGAGTAAACAAATAAATTTTGCTAAGCTAGACGACTATATGCATCAATTCAAGGGTAGTTGCTCCAGCATTGGTGCAAAGAAGGTGAAGAATGAATGTAACATATTCAATGAATATTGCGCGGCAGAAAACTCTGAGGGATGCTTCAAGAGTTTCCAACAAATCAAGCAAGAGTATACAATTTTGAAGAAGAAGCTTGAAACTTATTTCCAGATAGCAAGAGAAGCTGCTAAAACTAAGTGA 435 0.3724 MDKTRLQQQAFFMRNSLFEQGFLDEQFIQLEELQDDVNPNFVEEIVILFYSDSVRLVYKIEQALMSKQINFAKLDDYMHQFKGSCSSIGAKKVKNECNIFNEYCAAENSEGCFKSFQQIKQEYTILKKKLETYFQIAREAAKTK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal17g0330 144 Pfam Hpt domain 45 124 IPR008207 GO:0000160
Lal17g0330 144 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 138 IPR036641 GO:0000160
Lal17g0330 144 Gene3D HPT domain 1 144 IPR036641 GO:0000160
Lal17g0330 144 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Lal17g0330 144 PANTHER - 3 142 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lal17g0330 144 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 2-LIKE 3 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal17g0330 Lal-Chr17 2095634 2098777 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal17g0330 K14490 - gmx:100780856 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal17g0330 17 2095634 2098777 Lal17g0330 17 2095634 2098777 ECH
Lal20g1146 20 15887943 15889108 Lal17g0330 17 2095634 2098777 ECH
Lal25g0307 25 2104236 2107477 Lal17g0330 17 2095634 2098777 ECH