Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0274 ATGGGTGCTTCTCTTCCTCCCAAAGAGGCCAACCTCTTCAAGCTTATTGTTAAATCCTATGAAACCAAACAATACAAAAAGGGCCTCAAAGCAGCCGATGCCATTTTGAAAAAAATTCCAGATCACGGAGAGACTTTATCAATGAAGGGTTTGACGTTGAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTACGCCAAGGGCTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTCCTTTACCGGTCAGACAGAGAATACAGGGAAGCAATCAAGTGCTACCGAAATGCACTGAGAATAGATTCTGACAATCTTGAAATATTACGTGACCTATCACTCTTACAGGCACAAACGCGAGATTTAGCTGGCTTTGTTGAGACACGACAACAACTTCTGACTCTCAAGGCAAACCATCGCATGAACTGGATTGGCTTTGCTGTTGCCCATCATTTAAACTCCAATGCATCAAAGGCAGTGGAAATCCTGGAAGCATATGAAGGTACCTTAGAAGATGATTTTCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATATAAGATCTCTTTGTTAGAGGAATGTGGTTTTCTTGAGAAAGCTCTTGAGGAGTTGCACAAGAAGGAATTAGAAATTGTCGATAAGCTTGAATATAAAGAACAAGAGGTTTCTCTATTGGTGAAGCTTGGTCGCTTTGAAGAAGGCGGGAAATTGTACCAGTCATTACTTTCCATGAATCCTGACAATTATAGATATTATGAGGGCCTCCAAAAATGTGTTGGATTATATTCAGAAAATGGTCATTTTTCTCCAGATGAAATAGATCGGTTAGATGCCTTGTACAAAGCACTGAGGGAGCAATTTAAGTGGTCTTCTGCTGTTAAGAGAATACCACTAGATTTTCTACAAGATGACAGATTTAAAGAAGCAGCAGATAGTTATATTAGGACTTTCCTGACTAAGGGAGTTCCATCTCTGTTCTCTGATCTTTCTTCTTTGTACAATCACCCTGGGAAGGCGGACATTTTGGAACAACTTATTCTTGAGTTAGAGAACTCAATAAGGACAACTGGTCAATACCCTGGGAGGGTTGAAAAGGAGCCTCCTTCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGGCGGGGCCAATATGAAACTGCTCTTTCTAAAATCAACGAGGCTATAAAGCACACACCTACTGTCATTGATCTATATTCTGTCAAGAGTCGGATACTGAAACATGCTGGTGATTTGGCTGCTGCTGCTGCATTAGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGTTATGTTAACAGTGAATGTGTTAAGCGTATGCTGCAGACTGATCAGGTGGATTTGGCAGAAAAAACCGCTGTGTTGTTCACAAAAGAAGGGGATCAGCACACCAATCTCCATGATATGCAGTGCATGTGGTATGAGCTTGCCTCTGCTGACAGCTATTACCGACAAGGCGATCTTGGATTAGCTCTCAAGAAATTTCTAGCAGTGGAGAAGCATTATGCAGATATCTCCGAAGATCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGCACATATGTAGAAATGCTCAAGTTTCAAGACCGATTGCACTCACACACATATTTTCGTAAAGCAGCTGCTGGAGCTATCAGATGTTATATTAAATTGCATGATTCTCCTCCAAAGTCAACGACTGAGGATGATGATGAAATGTCCAAGTTGCTTCCTTCTCAGAAAAGGAAACTGAGGCAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAGAAAGAGGCAGAAGAAAAAAATGAAGAATCAAGCGCTGGTGGGGCATCAAAGTCTGGGAAACGGCTTGCAAAACCTGCTGATCCTGATCCACGTGGGGAAAAGTTGTTGCAGGTAAAGGCTTGTGAAGGGCTTTACTATATCTCTTGCAAAGCTCTATCTTATGACTTGATAGGCGCTGATGATCCTGGTTCTCATGGCACCACCACTCCTTTGTTTTTCAGTTCTTCTTCAACTGCTGCTATTCCTCTTTGTTCTTCTCCTCTGATTCTCACCCTTCCTCTTCCTTCAACCAAGCTCACTCAAAATAATTACCTAGTTTGTAGCCAAGACATTGAATTAGTCCTCAGTCCCTTCTTTGAGGCTCAAATTGAGCATAACCACAATCAATCAATTTCTGATGCGATGTCGGCTTTCATGGTGGTGGTGATTATTGTGGTGGTTTCCTTGCTGTTAGAGGTCGTTCACATGGTAGCTGGTTTCCTCTGCGAGAAGGCATATATTTTTGTGAGTATTGTCAATGATTTGGGCATGATCGACCATTTTGCTATTATGCACCACCTGGTTTTCGTGCATCGTACTATCACTACAATGGTGCAGCACAGAGTTTTGGACTGTATAATTATTCTGCCTATCCAGGTGTGCCATTGGTCTGCCTTACTTCAACTTGGTTCCTTCTATGGTTTTGGATCTTCTCAGGCTCCTTCTGGCTCAGCCACTTACGTGGTTTTGGCCTATCCTGGTTTAGGAGCCATTCATCATTTAACCTCCAGTCCAAACCTTGTGCAAGAGCTAGTGAAACAATTCTCTGCTGATCAGATCTTCATGGGTAATGGCATCAATATTTCTATTAAAGCATGTGGACATTCTATACTCTATCCTTCTACTACTAGTATCGCTTTATCTCTTAATAATCTTCTAGTTGTCCCCTCTATCACTAAAAATCTTCTTAGTGTTAAAGATCCATTATCCGAAGCCACAAAATACTTGAAGTTGCTGCAGAAACATTCACCTGATTCATTGGAGACACACTTGCTCTCTTTTGAATTGTATATGAGAAAACAGAAGGTTTTGCTTGCCTTCCAGGCTGTAAAGCAGTTGCTGAGGTTGGATGCTGAACACCCAGATTCTCATCGTTGTCTGATTAAATTCTTCCATAAAGTGGGATCCGTCAATGCACCTGTGACCGACACTGAGAAACTCATTTGGGGTGTCTTAGAAGCTGAGCGCCAAACTATTAGTGGGTTATTCTTATGTAGTCAGCTGCATGGGAAATCTTTGTTTGAGGCTAATAACTCTTTCCTTGAAAAACATAAAGATTCTTTGATGCATAGAGCTGCCTTTGGAGAAATGTTGTACATTTTGGATCCCAACAGAAGGTCTGAGGCCGTCCAGTTGATTGAAGGGTCAAGAAATAATCTTGTGCAAAGAAATGGAGCACGCGGACAGATCGGGGAATGGAAACTTAACGACTGTATTGCCGTTCATAAACTTCTTGGAACAGTGCTTGTTGATCAGGATGCGGCACTGAGATGGAAAGTGCGCTGCGCAGAGATTTTCTCCTACTCTACATACTTTGAGGGCAGCAACAGCTCTGTCTCTCCAAACTCTGTTCTGAATCAGATATGCAAGAGCACGGAAAACCGGAGTGCTAACCATTTGGTGGTTGATCACAATGAGTCAGTCATATCAAATGGGAAACTAGAGACGTTTAAAGATCTCGCCATCTCACAAAGTTGA 3570 0.4179 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKIPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALRIDSDNLEILRDLSLLQAQTRDLAGFVETRQQLLTLKANHRMNWIGFAVAHHLNSNASKAVEILEAYEGTLEDDFPPENERCEHGEMLLYKISLLEECGFLEKALEELHKKELEIVDKLEYKEQEVSLLVKLGRFEEGGKLYQSLLSMNPDNYRYYEGLQKCVGLYSENGHFSPDEIDRLDALYKALREQFKWSSAVKRIPLDFLQDDRFKEAADSYIRTFLTKGVPSLFSDLSSLYNHPGKADILEQLILELENSIRTTGQYPGRVEKEPPSTLMWTLFLLAQHYDRRGQYETALSKINEAIKHTPTVIDLYSVKSRILKHAGDLAAAAALADEARCMDLADRYVNSECVKRMLQTDQVDLAEKTAVLFTKEGDQHTNLHDMQCMWYELASADSYYRQGDLGLALKKFLAVEKHYADISEDQFDFHSYCLRKMTLRTYVEMLKFQDRLHSHTYFRKAAAGAIRCYIKLHDSPPKSTTEDDDEMSKLLPSQKRKLRQKQRKAEARAKKEAEEKNEESSAGGASKSGKRLAKPADPDPRGEKLLQVKACEGLYYISCKALSYDLIGADDPGSHGTTTPLFFSSSSTAAIPLCSSPLILTLPLPSTKLTQNNYLVCSQDIELVLSPFFEAQIEHNHNQSISDAMSAFMVVVIIVVVSLLLEVVHMVAGFLCEKAYIFVSIVNDLGMIDHFAIMHHLVFVHRTITTMVQHRVLDCIIILPIQVCHWSALLQLGSFYGFGSSQAPSGSATYVVLAYPGLGAIHHLTSSPNLVQELVKQFSADQIFMGNGINISIKACGHSILYPSTTSIALSLNNLLVVPSITKNLLSVKDPLSEATKYLKLLQKHSPDSLETHLLSFELYMRKQKVLLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSVNAPVTDTEKLIWGVLEAERQTISGLFLCSQLHGKSLFEANNSFLEKHKDSLMHRAAFGEMLYILDPNRRSEAVQLIEGSRNNLVQRNGARGQIGEWKLNDCIAVHKLLGTVLVDQDAALRWKVRCAEIFSYSTYFEGSNSSVSPNSVLNQICKSTENRSANHLVVDHNESVISNGKLETFKDLAISQS 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0274 1189 Gene3D - 921 1005 - -
Lal25g0274 1189 Gene3D - 505 653 - -
Lal25g0274 1189 MobiDBLite consensus disorder prediction 577 594 - -
Lal25g0274 1189 MobiDBLite consensus disorder prediction 577 643 - -
Lal25g0274 1189 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Lal25g0274 1189 SUPERFAMILY TPR-like 13 120 IPR011990 GO:0005515
Lal25g0274 1189 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 650 IPR021183 -
Lal25g0274 1189 Pfam N-terminal acetyltransferase A, auxiliary subunit 923 976 IPR021183 -
Lal25g0274 1189 Gene3D - 2 503 - -
Lal25g0274 1189 Coils Coil 596 620 - -
Lal25g0274 1189 Pfam Tetratricopeptide repeat 84 112 IPR019734 GO:0005515
Lal25g0274 1189 MobiDBLite consensus disorder prediction 606 622 - -
Lal25g0274 1189 SUPERFAMILY TPR-like 381 514 IPR011990 GO:0005515
Lal25g0274 1189 SMART tpr_5 77 110 IPR019734 GO:0005515
Lal25g0274 1189 SMART tpr_5 380 413 IPR019734 GO:0005515
Lal25g0274 1189 SMART tpr_5 43 76 IPR019734 GO:0005515
Lal25g0274 1189 PANTHER BNAC02G23120D PROTEIN 925 1167 - -
Lal25g0274 1189 PANTHER BNAC02G23120D PROTEIN 10 650 - -
Lal25g0274 1189 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 925 1167 - -
Lal25g0274 1189 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 650 - -
Lal25g0274 1189 SUPERFAMILY TPR-like 191 427 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0274 Lal-Chr25 1884159 1898552 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0274 K20792 - gmx:100818973 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0274 25 1884159 1898552 Lal25g0274 25 1884159 1898552 ECH
Lal25g0274 25 1884159 1898552 Lal8g0228 8 1526939 1540345 LSH
Lal25g0274 25 1884159 1898552 Lal20g1194 20 16430048 16444039 PCT
Lal20g1194 20 16430048 16444039 Lal25g0274 25 1884159 1898552 PCT