Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0266 ATGGATGCTGTTCTTCAAACCAGAGGCCTTCTCTCTCTCCCCACAAAACCCAAAAACAGTGTCTTTCACCCTTCCCATGGCTTAAAGCACAGATTTTTCAACTCAAAGCCCAAAAACTTTGGTGGGGTTTCTCTATCTACCAATATTTTCCAAAAAGTTAATACCTTTGTCCCATCAAAAAGTAACCATGTTTTTAGCTTAAAGGAGAGAAATTTATTCATTTGTAGGGCTGAAGCAGCAGCTTCAGCTGATGGGCAACCTTTGTTTGATGAAAAAGAAATTGAGAAACCTAAGATTCTGGGTATTGAGGTTACAACTTTGAAAAAGATTATACCTTTGGGGTTGATGTTTTTTTGCATTCTTTTCAATTATACCATTCTTAGAGACACAAAAGATGTGCTTGTTGTTACAGCTAAAGGAAGCAGTGCTGAGATTATTCCATTCCTCAAAACTTGGGTGAATCTTCCTATGGCTATTGGGTTTATGTTGTTGTATACAAAGTTGTCTAATGCGTTATCCAAACAAGCTCTCTTTTATTCAGTGATTCTTCCCTTTATTGCTTTCTTTGGGGCCTTTGGTTTTGTTTTATATCCTCTTAGTAGCCATATTCACCCTGAGGCACTAGCAGACAAACTTCTTAACATCCTTGGCCCAAGGTTTCTTGGTCCACTTGCAATTTTGAGAATCTGGAGTTTCTGTTTGTTCTATGTCATGGCTGAATTGTGGGGTAGTGTGGTGGTTTCTGTGCTGTTTTGGGGGTTTGCCAATCAGATAACTACAGTTGATGAAGCAAAACGATTCTATCCACTATTTGGACTTGGTGCCAATGTAGCCCTTGTGTTCTCTGGCCGGACCGTGAAATACTTCTCTAATATGAGGCAACATTTAGGTCCTGGAGTTGATGGTTGGGCCATTTCTCTAAAAGCAATGATGAGTATAGTTGTGGGAATGGGACTTGCAATCTGTTTCCTGTATTGGTGGGTGAACAATTATGTTCCACTTCCAACACGTAGCAAGAAGAAGAAGGCGAAGCCTAAAATGGGAACAATGGAAAGCTTGAAGTTCTTGGTATCTTCAAGGTATATAAGAGATCTCGCCACTTTAGTGGTTGCATATGGAATTAGCATTAATCTTGTTGAGGTTACATGGAAATCGAAGCTCAAAGCTCAGTTTCCTAGCCCGAACGAGTACTCATCATTCATGGGCGACTTCTCAACTGCAACCGGAATTGTCACATTCATAATGATGCTTCTAAGCCAATTTATATTTGACAAATATGGATGGGGTGTTGCCGCCAAGATCACACCTTCCGTCCTGCTTTTGACAGGAGTTGGTTTCTTTTCTCTAATATTATTTGGAGGCCCGGTCGCACCTATTATTGCCAAGTTTGGAATGACTCCACTGCTAGCAGCTGTATATGTCGGTGCGCTTCAGAACATATTCAGCAAGAGTGCTAAGTACAGCTTATTCGATCCATGCAAAGAAATGGCCTACATACCCTTGGATGAGGATACCAAGGTGAAAGGAAAGGCCGCCATCGATGTTGTGTGCAACCCGTTGGGAAAATCGGGAGGTGCACTAATTCAGCAGTTTATGATCTTAACATTTGGATCACTAGCTAATTCAACTCCATACCTTGGAGGAATACTTCTTGTGATTGTTCTTGCATGGTTAGCAGCAGCAAAGTCGTTGGACACACAGTTTACCGAGTTGCGTCAAGAAGAAGAAATCGAGAAAGAGATGGAAAGAGCAGCTTCTCTTAAGATTCCAGTGTTGGCTGAGAAGAACAATGAAGGTGGAAATGGTTCTCCTGAAAGTGTTTCACCATTGAATCCAGCAGCAGGTGGCTCTTCATCTACCAATATTTGA 1869 0.4131 MDAVLQTRGLLSLPTKPKNSVFHPSHGLKHRFFNSKPKNFGGVSLSTNIFQKVNTFVPSKSNHVFSLKERNLFICRAEAAASADGQPLFDEKEIEKPKILGIEVTTLKKIIPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNALSKQALFYSVILPFIAFFGAFGFVLYPLSSHIHPEALADKLLNILGPRFLGPLAILRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTVDEAKRFYPLFGLGANVALVFSGRTVKYFSNMRQHLGPGVDGWAISLKAMMSIVVGMGLAICFLYWWVNNYVPLPTRSKKKKAKPKMGTMESLKFLVSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIVTFIMMLLSQFIFDKYGWGVAAKITPSVLLLTGVGFFSLILFGGPVAPIIAKFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLAAAKSLDTQFTELRQEEEIEKEMERAASLKIPVLAEKNNEGGNGSPESVSPLNPAAGGSSSTNI 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0266 622 Pfam TLC ATP/ADP transporter 97 568 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lal25g0266 622 TIGRFAM AAA: ADP/ATP carrier protein family 102 568 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lal25g0266 622 SUPERFAMILY MFS general substrate transporter 110 561 IPR036259 -
Lal25g0266 622 PANTHER ADP,ATP CARRIER PROTEIN 2, CHLOROPLASTIC 1 602 - -
Lal25g0266 622 MobiDBLite consensus disorder prediction 599 622 - -
Lal25g0266 622 MobiDBLite consensus disorder prediction 593 622 - -
Lal25g0266 622 PANTHER - 1 602 IPR004667 GO:0005471|GO:0006862|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0266 Lal-Chr25 1814768 1818267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0266 1 603 Organic Solute Cotransporters AT1G80300 81.967 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0266 K03301 - gmx:100778352 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0266 25 1814768 1818267 Lal25g0266 25 1814768 1818267 ECH
Lal25g0266 25 1814768 1818267 Lal10g1158 10 18236478 18240016 LSH
Lal25g0266 25 1814768 1818267 Lal8g0223 8 1501466 1505214 LSH
Lal25g0266 25 1814768 1818267 Lal20g1199 20 16475594 16480328 PCT
Lal25g0266 25 1814768 1818267 Lal18g0197 18 1628700 1632306 PCT
Lal20g1199 20 16475594 16480328 Lal25g0266 25 1814768 1818267 PCT
Lal18g0197 18 1628700 1632306 Lal25g0266 25 1814768 1818267 PCT