Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1199 ATGGATGCTGTTCTTCAAACCAAAGGGTTTCTTTCCCTCACTTCAAACCCCAGAATAAGAGCTTTACACCCTTCCAATGGCTTAAAGCAAAGATTTTTCTCACCAAAACTGAAAACCATTAATGGGTTTTCTCCTTTACATGCTACAAATCATGGATACCAAAAACTCCATTCTACTTCTTCAAAAGTTGAGATTTTTGGTCAAAAGGACAAAAATTTATTCATATGCAGGGCTGAGGCTGATGGGAAACCAGTGTTTGGAGAAAATGAGGTTGTTGTGGAACAAAAGATTCTGGGTATTGAGGTTACAACTCTTAAGAAGATTATACCACTTGGGTTGATGTTCTTTTGCATCCTTTTCAATTATACCATTTTAAGGGACACTAAGGATGTTTTGGTTATTACAGCTAGAGGGAGCAGTGCTGAGATTATACCATTTCTCAAAACATGGGTCAACCTTCCTATGGCTATTGGGTTCATGTTGTTGTATACAAAATTGGCTAATGTTTTGTCCAAGCAAGCTCTTTTCTATAGTGTTATTCTTCCATTTATTGCTTTCTTTGGTGCTTTTGGATTTGTTTTGTATCCTCTTAGCAGCTATATCCACCCTGAGGTACTTGCAGATAAGCTTCTCAACATCCTTGGTCCTAGGTTCCTTGGTCCACTTGCAATTTTGAGAATATGGAGCTTCTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTCATTTCTGTGCTGTTTTGGGGGTTTGCTAATCAGATAACTACAGTTGAGGAAGCAAAACGATTTTATCCGCTGTTTGGACTTGGGGCCAATATAGCACTTATATTCTCTGGCCGAACCGTGAAGTACTTTTCTAATCTGAGGCAGAATTTAGGCCCCGGAGTTGATGGTTGGGCAATCTCTCTGAAAGGAATGATGAGCATAGTTGTGCTTTTGGGATTCGTAATCTGTCTTCTGTACTGGTGGGTGAATAACTTTGTTCCACTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACTATGGAGAGCTTGAAGTTCTTGGTGTCTTCACCGTACATCCGAGATCTTGCCACTTTAGTGGTTGCATATGGAATTAGCATTAATCTTGTTGAGGTTACATGGAAGTCTAAGCTCAAAGCTCAGTTTCCTAGCCCAAATGAGTACTCATCTTTTATGGGCGATTTCTCGACCGCAACTGGAATTGCGACATTCACAATGATGCTTCTAAGTCAATTCATATTCGACAAATATGGATGGGGAGTTGCTGCCAAGATCACACCTACAGTGCTGCTTTTGACAGGAGTTGGTTTCTTTTCTCTTATATTGTTCGGAGGCCCCGTTGCGCCTATTATTGCGAAGTTCGGAATGACTCCACTACTAGCAGCTGTATACGTAGGCGCTTTGCAGAACATATTCAGCAAGAGTGCTAAGTACAGTTTATTCGATCCTTGCAAGGAGATGGCCTACATACCCTTGGATGAGGATACCAAGGTTAAAGGCAAGGCAGCCATCGATGTCGTCTGCAACCCATTAGGGAAATCGGGAGGCGCCCTTATTCAACAATTTATGATCTTAAGTTTCGGTTCACTAGCCAATTCAACTCCATACTTGGGAGGAGTGCTTCTTGTGATTGTTCTTGCCTGGTTAGCAGCAGCCAAGTCCTTGGATACACAGTTCACCGCGTTGCGTCGCGAGGAAGAACTCGAGAAAGAGATGGAAAGAGCTGACGCCCTTAAGATACCAGTGGTGGCCGAGAATGGTAACGGTGGAAATGGTTCTTCAGCTTCAGGTGACTCTTCAAGTACTCCATCTGAAGCATCAAGTCCTCACAATAATTAA 1860 0.4237 MDAVLQTKGFLSLTSNPRIRALHPSNGLKQRFFSPKLKTINGFSPLHATNHGYQKLHSTSSKVEIFGQKDKNLFICRAEADGKPVFGENEVVVEQKILGIEVTTLKKIIPLGLMFFCILFNYTILRDTKDVLVITARGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSSYIHPEVLADKLLNILGPRFLGPLAILRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKRFYPLFGLGANIALIFSGRTVKYFSNLRQNLGPGVDGWAISLKGMMSIVVLLGFVICLLYWWVNNFVPLPTRSKKKKEKPKMGTMESLKFLVSSPYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGGPVAPIIAKFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGGVLLVIVLAWLAAAKSLDTQFTALRREEELEKEMERADALKIPVVAENGNGGNGSSASGDSSSTPSEASSPHNN 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1199 619 Pfam TLC ATP/ADP transporter 94 566 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lal20g1199 619 PANTHER ADP,ATP CARRIER PROTEIN 2, CHLOROPLASTIC 1 616 - -
Lal20g1199 619 MobiDBLite consensus disorder prediction 594 619 - -
Lal20g1199 619 PANTHER - 1 616 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lal20g1199 619 SUPERFAMILY MFS general substrate transporter 210 473 IPR036259 -
Lal20g1199 619 TIGRFAM AAA: ADP/ATP carrier protein family 100 566 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lal20g1199 619 MobiDBLite consensus disorder prediction 586 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1199 Lal-Chr20 16475594 16480328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1199 1 600 Organic Solute Cotransporters AT1G80300 79.441 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1199 K03301 - jre:108993173 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1199 20 16475594 16480328 Lal20g1199 20 16475594 16480328 ECH
Lal20g1199 20 16475594 16480328 Lal18g0197 18 1628700 1632306 LSH
Lal25g0266 25 1814768 1818267 Lal20g1199 20 16475594 16480328 PCT
Lal10g1158 10 18236478 18240016 Lal20g1199 20 16475594 16480328 PCT
Lal8g0223 8 1501466 1505214 Lal20g1199 20 16475594 16480328 PCT
Lal20g1199 20 16475594 16480328 Lal25g0266 25 1814768 1818267 PCT
Lal20g1199 20 16475594 16480328 Lal10g1158 10 18236478 18240016 PCT
Lal20g1199 20 16475594 16480328 Lal8g0223 8 1501466 1505214 PCT