Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1158 ATGGATGCTGTTCTTCAAACCAGAGGTCTTCTTCCTCTCCCCACCAACCCCAGAAACAGGATCCTCTACCCTTCCCATGGCTTAAAGCACAGATTTTTCACCATTAAGCCCAAAATCCTTGCTGGGTCTTCTATAACAACCAATGTTTCCCAAAGTTTCAATACCTTTGTCCAATCAAAAAATAATAATGTTTTTGGCTTAAAGGATAGAAATTTATTTATTTGTAGAGCTAAAGCAACTGCAGCAGCTGATGGACAACCTTTGTTTGATGAAAAACAAATTGAAAAACCAAGGATTTTGGGTATTGAAGTTACAACCTTGAAAAAGATTATACCTTTGGGGTTGATGTTTTTTTGCATTCTTTTCAATTACACCATTCTAAGAGACACAAAAGATGTATTGGTTGTGACTGCTCGAGGAAGCAGTGCTGAGATTATACCATTTCTCAAAACTTGGGTGAATCTTCCTATGGCTATTGGGTTTATGGTGTTGTATACAAAGTTGTCAAATGTGTTATCCAAGCAAGCTCTCTTTTATTCAGTGATTCTTCCCTTTATTGCTTTCTTTGGGGCATTTGGTTTTGTTTTGTATCCTCTTAGTAGCTATATTCACCCTGAAGCGTTAGCAGATAACCTTCTTAACATCCTTGGCCCAAGGTTTCTTGGTCCACTTGCAATTTTGAGAATCTGGAGTTTCTGTTTGTTCTATGTCATGGCTGAGTTGTGGGGGAGTGTGGTGGTTTCTGTGCTGTTTTGGGGGTTTGCCAATCAGATTACTACAATTGATGAAGCAAAACGATTCTATCCGCTGTTTGGACTTGGGGCCAATGTAGCACTTGTGTTCTCTGGCCGAACAGTGAAATACTTTTCTAATATGAGGCAAACTTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTAAAAGCAATGATGAGCATAGTTGTGGGAATGGGACTTGTAATCTGTTTCCTCTATTGGTGGGTGAATAATTATGTTCCTCTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCTTCAAGATACATACGAGATCTTGCCACTTTAGTGGTTGCATATGGAATTAGCATTAATCTTGTTGAGGTTACATGGAAATCAAAGCTGAAAGCTCAGTATCCTAGCCCAAACGAGTACTCATCATTCATGGGTGACTTCTCAACTGCAACCGGAATCATCACATTCACGATGATGCTTTTAAGCCAATTTATTTTCAACAAATATGGATGGGGTGTTGCTGCAAAGATCACACCTACCGTCCTGCTTTTGACAGGAGCTGGTTTCTTTTCTCTTATATTATTTGGTGGCCCGGTTGCACCTATTATTGCCAAGTTTGGAATGACTCCATTGCTAGCAGCTGTATATGTCGGTGCCCTTCAAAATATATTCAGCAAGAGTGCTAAGTACAGCTTGTTCGACCCATGCAAAGAAATGGCTTACATACCCTTGGATGAGGATACCAAGGTGAAAGGGAAGGCAGCCATCGATGTCGTATGCAACCCGTTAGGAAAATCTGGAGGTGCTTTAATTCAGCAGTTTATGATCTTAACTTTTGGATCACTGGCTAATTCAACTCCATACTTGGGAGGTATACTTCTTGTGATTGTTCTTGCATGGTTAGCAGCAGCCAAGTCCTTGGACACACAGTTTACTGAGTTGCGCCGAGAAGAAGAACTCGAGAAAGAGATGGAAAGAGCAGCTTCTCTTAAGATACCAGTGGTGGCCGAGAATAACGAAGGTGGAACACCACCATTGAATCCAGCAGCAGGTGGCTCCTCAACTACCAATATTTGA 1848 0.4129 MDAVLQTRGLLPLPTNPRNRILYPSHGLKHRFFTIKPKILAGSSITTNVSQSFNTFVQSKNNNVFGLKDRNLFICRAKATAAADGQPLFDEKQIEKPRILGIEVTTLKKIIPLGLMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAIGFMVLYTKLSNVLSKQALFYSVILPFIAFFGAFGFVLYPLSSYIHPEALADNLLNILGPRFLGPLAILRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTIDEAKRFYPLFGLGANVALVFSGRTVKYFSNMRQTLGPGVDGWAISLKAMMSIVVGMGLVICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESLKFLVSSRYIRDLATLVVAYGISINLVEVTWKSKLKAQYPSPNEYSSFMGDFSTATGIITFTMMLLSQFIFNKYGWGVAAKITPTVLLLTGAGFFSLILFGGPVAPIIAKFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLAAAKSLDTQFTELRREEELEKEMERAASLKIPVVAENNEGGTPPLNPAAGGSSTTNI 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1158 615 MobiDBLite consensus disorder prediction 594 615 - -
Lal10g1158 615 TIGRFAM AAA: ADP/ATP carrier protein family 102 568 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lal10g1158 615 PANTHER - 1 596 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lal10g1158 615 Pfam TLC ATP/ADP transporter 98 568 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lal10g1158 615 PANTHER ADP,ATP CARRIER PROTEIN 2, CHLOROPLASTIC 1 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1158 Lal-Chr10 18236478 18240016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal10g1158 1 598 Organic Solute Cotransporters AT1G80300 80.693 0.0 952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1158 K03301 - gmx:100778352 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1158 10 18236478 18240016 Lal10g1158 10 18236478 18240016 ECH
Lal25g0266 25 1814768 1818267 Lal10g1158 10 18236478 18240016 LSH
Lal10g1158 10 18236478 18240016 Lal8g0223 8 1501466 1505214 LSH
Lal10g1158 10 18236478 18240016 Lal20g1199 20 16475594 16480328 PCT
Lal10g1158 10 18236478 18240016 Lal18g0197 18 1628700 1632306 PCT
Lal20g1199 20 16475594 16480328 Lal10g1158 10 18236478 18240016 PCT
Lal18g0197 18 1628700 1632306 Lal10g1158 10 18236478 18240016 PCT