Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0264 ATGAGCTATGCACATTCTCATATGGGCTCTGGTAGTAGAACCGCTCGAAGAACTTTCGAGTTCGGGAAGACATATGTAGTGAGGCCAAAAGGAAAACACCAGGCCACTCTAGTTTGGCTGCATGGTCTTGGTGATAACGGTTTAAGCTCATCTCAGCTACTTGAATCCCTTCCTCTCACAAATATAAAATGGATTTGTCCAACTGCTCCGATCCGTCCTGTTGCTTTACTTGGTGGTTTTCCTTGCACTGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGTCCTGATGATTGGGAGGGTTTAGATGCCTCAGCATCACACATTGCTAACTTGTTATCAACTGAGCCAGCTGATGTGAAAGTTGGTATTGGAGGGTTCAGCATGGGTGCAGCAATAGCCCAATACTCTGCAACTTGTTTTGCCATAGGAAGGTATGGAAATGGAATACCATACCCTCTCAACTTAAGAGCAATCATTGGACTAAGTGGCTGGCTTCCAGGATCAAGGAGCTTAAGGAACAAGATAGAAGTATCACATGAAGCAAGAAGGAGAGCAGCTTCATTACCCATTTTGCTGTGCCATGGAATCAGTGATGATGTAGTCTTATGGAAGTATGGAGAGAAATCAGCCCAATCATTAAGTTCAGCAGGGTTTCGATATGTTGCATTCAAATCATATGATGGGCTTGGTCATTACACAGTTCCTAGAGAGATGGGTGAGGTTTGCACCTGGCTTAGTTCAAGGTTGGGGCTAGAGGGATCTTCTTAA 771 0.4449 MSYAHSHMGSGSRTARRTFEFGKTYVVRPKGKHQATLVWLHGLGDNGLSSSQLLESLPLTNIKWICPTAPIRPVALLGGFPCTAWFDVGELSEDGPDDWEGLDASASHIANLLSTEPADVKVGIGGFSMGAAIAQYSATCFAIGRYGNGIPYPLNLRAIIGLSGWLPGSRSLRNKIEVSHEARRRAASLPILLCHGISDDVVLWKYGEKSAQSLSSAGFRYVAFKSYDGLGHYTVPREMGEVCTWLSSRLGLEGSS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0264 256 Gene3D alpha/beta hydrolase 14 251 IPR029058 -
Lal25g0264 256 Pfam Phospholipase/Carboxylesterase 25 247 IPR003140 GO:0016787
Lal25g0264 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Lal25g0264 256 SUPERFAMILY alpha/beta-Hydrolases 25 250 IPR029058 -
Lal25g0264 256 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0264 Lal-Chr25 1793451 1798414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal25g0264 1 255 Acyl Lipid Metabolism Gene Families AT3G15650 73.962 2.03e-129 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0264 K06130 - gmx:100781212 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1043 21 12233023 12242806 Lal25g0264 25 1793451 1798414 ECH
Lal25g0264 25 1793451 1798414 Lal25g0264 25 1793451 1798414 ECH
Lal25g0264 25 1793451 1798414 Lal20g1202 20 16512049 16513839 PCT
Lal20g1202 20 16512049 16513839 Lal25g0264 25 1793451 1798414 PCT