Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1202 ATGGTTCAGATTAAATGGATTTGCCCAACTGCTCCTACCCGTCCTGTAGCAATTCTCGGTGGGTTTGATATGGGAGAAATTTCAGAAGATGGTGCAAATGATTGGGAGGGTTTAGATGCCTCAGCAGCACACATTGCCAACTTGTTGTCAACAGAGCCAGTTGATGTGAAAGTTGGAGTTGGAGGCTTCAGTATGGGTGCTGCAATGGCCCTACACTCAGCAATTTGTTTTGCTATAGGAAAGTATGAAAATGGCATTCAATACCCTATCAACTTAAGAGCTGTTGTTGGACTAAGCGGCTGGGTTCCAGGATCAAGGACCTTAAGGAACAAAATAGAAGTGTCATATGAAGCAAGAAGGCGAGCAGCTTCATTGCCCATTTTGCTGAGTCATGGAATCAGTGATGATGAAGTACTCTACAAATATGGAGAGAAATCAGCCCAATCCTTAAGTTCAGCAGGGTTTCACTATATTACATTCAAATCCTATGAAGGGCTTGGTCATTATACAGTTCCTAGAGAGATGATCGATGTCTCCAATTGGCTCAACTCAAGGCTAGGGTTTGGGGGATCCACATAA 579 0.4352 MVQIKWICPTAPTRPVAILGGFDMGEISEDGANDWEGLDASAAHIANLLSTEPVDVKVGVGGFSMGAAMALHSAICFAIGKYENGIQYPINLRAVVGLSGWVPGSRTLRNKIEVSYEARRRAASLPILLSHGISDDEVLYKYGEKSAQSLSSAGFHYITFKSYEGLGHYTVPREMIDVSNWLNSRLGFGGST 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1202 192 SUPERFAMILY alpha/beta-Hydrolases 4 186 IPR029058 -
Lal20g1202 192 Pfam Phospholipase/Carboxylesterase 3 183 IPR003140 GO:0016787
Lal20g1202 192 Gene3D alpha/beta hydrolase 1 187 IPR029058 -
Lal20g1202 192 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1202 Lal-Chr20 16512049 16513839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal20g1202 3 191 Acyl Lipid Metabolism Gene Families AT3G15650 68.205 2.36e-91 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1202 K06130 - gmx:100782153 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1043 21 12233023 12242806 Lal20g1202 20 16512049 16513839 ECH
Lal20g1202 20 16512049 16513839 Lal20g1202 20 16512049 16513839 ECH
Lal25g0264 25 1793451 1798414 Lal20g1202 20 16512049 16513839 PCT
Lal20g1202 20 16512049 16513839 Lal25g0264 25 1793451 1798414 PCT