Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal21g1043 ATGAGCTTTGCTGCACCATCAATTGGTTCTGCTGGTGGTAGATCTGCTCTACGAGCATTTGAGTTTGGAAGAACATATGTTGTTAGACCCAAGGGTAAACACCAAGCAACTATAGTTTGGTTGCACGGCCTAGGTGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATTTGTCCAACCGCTCCTACTCGGCCAATATCTATATTTGGTGGCTTTCCTTCTACTGCTTGGTTTGATGTGGGAGAACTTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCAGCTGCACATGTTGCTAATTTGTTGTCAACCGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTTAGCATGGGAGCGGCTACTGCCCTTTACTCTGCAACCTGCTTCACTGTTGGAAAATATGGGAATGGCAATCCTTATCCGGCGAACTTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGTGCAAAGACCTTGAGTAACAAGTTACAAGGAGTAGGTGAAGCCACGGGACGTGCTCAATCCTTTCCTGTTTTGCTGTGTCACGGAAAAGGTGATGATGTGGTCTCCTTCAAATTTGGTGATAAATCATCAAAATGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAACGGGCTTGGCCACTACACAATTCCTGAAGAGATGGATGAGGTTTGTGCTTGGCTAAGAAGAGTTTATTTTGTTCTTACGTATCCTTAG 774 0.4406 MSFAAPSIGSAGGRSALRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPISIFGGFPSTAWFDVGELSEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSATCFTVGKYGNGNPYPANLSAAVGLSGWLPCAKTLSNKLQGVGEATGRAQSFPVLLCHGKGDDVVSFKFGDKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLRRVYFVLTYP 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal21g1043 257 Pfam Phospholipase/Carboxylesterase 26 248 IPR003140 GO:0016787
Lal21g1043 257 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 248 - -
Lal21g1043 257 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 248 - -
Lal21g1043 257 Gene3D alpha/beta hydrolase 16 251 IPR029058 -
Lal21g1043 257 SUPERFAMILY alpha/beta-Hydrolases 26 249 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal21g1043 Lal-Chr21 12233023 12242806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal21g1043 1 247 Acyl Lipid Metabolism Gene Families AT5G20060 74.494 6.15e-140 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal21g1043 K06130 - gmx:100796190 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal21g1043 21 12233023 12242806 Lal20g1202 20 16512049 16513839 ECH
Lal21g1043 21 12233023 12242806 Lal25g0264 25 1793451 1798414 ECH
Lal21g1043 21 12233023 12242806 Lal21g1043 21 12233023 12242806 ECH