Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0253 ATGACCCTTTTGGTTTCTGAGTCAGTTACACAAAAGATGAAAGAAGGGTTGGTTGTAGAAGATGGATATGTGTACAAAGAAGAGATCCATTTCACAGTGCTTAAGACTTCGCTTTTCTTCTCAGGTGATGGTTTCACTGTGTATGATTGTAAGGGTAAACTTGTGTTTCGTGTTGATTCTTATGGACCAGATACTACTAAAGATGAACTTATTCTTATGGATCCAAATGGACGTTGTATCCTCACTGTTCGCCGTAAGAGGCCAAGTCTACATCAACGGTGGGAAGGATTTAAAGGGGAGAGAATGGACGGTGATAAACCAATCTTCAGCGTGAAGAGAGCATCAATAATCGGACGGTCACGGACGAGTGTAACAGTGGAGGTGTACGATAACCCAGGTGAGGAGTACCACATTGAAGGATGCTTCTCACAACGTTGCTGCACCGTTATCAACGCCGTGAAGGAACCAATGGCTGAGATTAGTCGCAAGGTGGACCCCACCACGTGCGTGATGCTTGGGAAAGAAGTTTTCTCTCTTTCCGTTAAGCCTGGTTTTGATGCTGCTTTCGCGATGGGATTTGTTCTCATACTTGATCAGATCAACGGTGATAGTTACTTTGATAATGATGCAACTTCAGAACCTACGGTGCATCCTACCACAGAGGATTAA 669 0.441 MTLLVSESVTQKMKEGLVVEDGYVYKEEIHFTVLKTSLFFSGDGFTVYDCKGKLVFRVDSYGPDTTKDELILMDPNGRCILTVRRKRPSLHQRWEGFKGERMDGDKPIFSVKRASIIGRSRTSVTVEVYDNPGEEYHIEGCFSQRCCTVINAVKEPMAEISRKVDPTTCVMLGKEVFSLSVKPGFDAAFAMGFVLILDQINGDSYFDNDATSEPTVHPTTED 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0253 222 Gene3D - 16 205 IPR038595 -
Lal25g0253 222 PANTHER - 16 210 IPR007612 -
Lal25g0253 222 PANTHER LURP-ONE-LIKE PROTEIN 16 210 - -
Lal25g0253 222 Pfam LURP-one-related 18 196 IPR007612 -
Lal25g0253 222 SUPERFAMILY Tubby C-terminal domain-like 17 201 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0253 Lal-Chr25 1734144 1736079 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0253 - - gmx:100787085 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0253 25 1734144 1736079 Lal25g0253 25 1734144 1736079 ECH
Lal25g0253 25 1734144 1736079 Lal10g1179 10 18328432 18329635 LSH
Lal25g0253 25 1734144 1736079 Lal20g1219 20 16680481 16682274 PCT
Lal20g1219 20 16680481 16682274 Lal25g0253 25 1734144 1736079 PCT