Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal10g1179 ATGACCCTTTTGGATTGTAGATCAAGTGCAGAAAAGATGAAAAAGGGTTTGGTTGAGAAAGAAGAGATGCAACTGACAGTGCTAAAGACCTCTCTGTTCTTTGATGGTGATGGATTCACTGTGTATGATTGCAATGGCAAATTAGTATTCCGCGTTGACTCTTATGGACCACACACCATTACAGATGACCTTGTTCTTATGGATCCAAATGGACGTTGTCTTCTTACCCTTCGCCGTAAGAGGCCAAGTCTACATCAACGGTGGGAAGGATTTAAAGGGGAGAGAATGGACGGTGATAAACCAATCTTCAGCGCGAAGAAAACATCAATGATCAAACGTGCGAGCGTGACAGTGGAGGTGTACGATAAGCCAGGTGAGGATTACCACATTGAAGGATGTTATTCACAACGTTGCTGCACCATTAAGAATGGCGTTAAGAAAACAATGGCTGTGATTAATCGGAAGGTGGACCCCACAACGAGTGTGATGCTTGGGAAGGAAGTGTTCTCTCTTTGCGTTAAGCCTGGTTTTGATGCTATTTTTGCTATGGGATTTGTCCTCATACTTGATCAAATCAACGGTGATAGTTACTTTGATAACGATTCAACCTCAGACCATATGGTGCACCCTACTACATAG 639 0.4319 MTLLDCRSSAEKMKKGLVEKEEMQLTVLKTSLFFDGDGFTVYDCNGKLVFRVDSYGPHTITDDLVLMDPNGRCLLTLRRKRPSLHQRWEGFKGERMDGDKPIFSAKKTSMIKRASVTVEVYDKPGEDYHIEGCYSQRCCTIKNGVKKTMAVINRKVDPTTSVMLGKEVFSLCVKPGFDAIFAMGFVLILDQINGDSYFDNDSTSDHMVHPTT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal10g1179 212 SUPERFAMILY Tubby C-terminal domain-like 18 193 IPR025659 -
Lal10g1179 212 PANTHER LURP-ONE-LIKE PROTEIN 18 202 - -
Lal10g1179 212 PANTHER - 18 202 IPR007612 -
Lal10g1179 212 Pfam LURP-one-related 17 188 IPR007612 -
Lal10g1179 212 Gene3D - 14 197 IPR038595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal10g1179 Lal-Chr10 18328432 18329635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal10g1179 - - gmx:100787085 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal10g1179 10 18328432 18329635 Lal10g1179 10 18328432 18329635 ECH
Lal25g0253 25 1734144 1736079 Lal10g1179 10 18328432 18329635 LSH
Lal10g1179 10 18328432 18329635 Lal20g1219 20 16680481 16682274 PCT
Lal20g1219 20 16680481 16682274 Lal10g1179 10 18328432 18329635 PCT