Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g1219 ATGAAGGAAGAGTTTGTAGTGCAAGATGGGTATGTGGTTAAGGAAGAGACTCACTTAACAGTGTTAAAAACATGTTTGTTCTATGCTGGAGATGGGTTCAAAGTGTATGATCACAAGGGCCAACTCGTCTTCCGAGTTGACTCATATGGACCTAACACTCATCACAAAGACGAGGTTGTTCTCATGGATCCATGTGGTCGTTGTCTTCTAACCCTTTGCTCTAAGAAACCGAGTTTGCATCAACGGTGGGAAGGGTTCAAAGGCGAGAGAATGAACGGTGATAAAGCAATTTTCAGCGTGAAGAGATCATCCATCATCGAACGGTCACAAACAAGCATGACAGTAGAGGTGTATGATAACTCCGCTGTGGAGTACCACACCGAAGGGTGCTTCTCGCAAAGACGCTGCAAAGTTTTCAACACTGTGAAAAAGAAATCAATGGTTGAGATTCATCGTAAAGTGGACCCCACAACAGGTGTCACGCTTGGGAAAGAAGTGTTCTCGCTTTGCGTTAAGCGTGGTTTTGATATGGTGTTTGCCATGGGATTAGTTTTGGTTCTTGATCAAATCAACGGTCAGAATTACTTTGATAGTGTAACCACAAAGGTTCTTGTGCACCCTATTGTAGAGGATTTTAGACTAAATCAACTTAACCTTACTAATAGTCCTTGGAGTTTTAAGTTTATTAGAGGAAGGATTCCTTTTTGCCCTTTTATTAGGGACCTTGTAAAGTTTATATCCATAAAAGATAGGATTTAA 759 0.4124 MKEEFVVQDGYVVKEETHLTVLKTCLFYAGDGFKVYDHKGQLVFRVDSYGPNTHHKDEVVLMDPCGRCLLTLCSKKPSLHQRWEGFKGERMNGDKAIFSVKRSSIIERSQTSMTVEVYDNSAVEYHTEGCFSQRRCKVFNTVKKKSMVEIHRKVDPTTGVTLGKEVFSLCVKRGFDMVFAMGLVLVLDQINGQNYFDSVTTKVLVHPIVEDFRLNQLNLTNSPWSFKFIRGRIPFCPFIRDLVKFISIKDRI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g1219 252 PANTHER LURP-ONE-LIKE PROTEIN 6 203 - -
Lal20g1219 252 Gene3D - 4 195 IPR038595 -
Lal20g1219 252 SUPERFAMILY Tubby C-terminal domain-like 5 191 IPR025659 -
Lal20g1219 252 PANTHER - 6 203 IPR007612 -
Lal20g1219 252 Pfam LURP-one-related 5 186 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g1219 Lal-Chr20 16680481 16682274 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g1219 - - lang:109347772 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g1219 20 16680481 16682274 Lal20g1219 20 16680481 16682274 ECH
Lal25g0253 25 1734144 1736079 Lal20g1219 20 16680481 16682274 PCT
Lal10g1179 10 18328432 18329635 Lal20g1219 20 16680481 16682274 PCT
Lal20g1219 20 16680481 16682274 Lal25g0253 25 1734144 1736079 PCT
Lal20g1219 20 16680481 16682274 Lal10g1179 10 18328432 18329635 PCT