Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal25g0199 ATGTGTGTGTCTTTTCTTATGTTGTTTTCTCTCATATTTGTTTCAACTTCCATGTCTGCTTCTAGTTATTCCACTAACAATGACCTTCACTTTTCTTCAACTCCTTCTCTTCCCAAACTACAAGCAGAAAATCTCATAAGAGGCCTTAATCTATTCCCAAAATATACCATTAATACACCACTCAATGACCCTCATTTTGTTCCTGGAAAGATTGTGGAGAAGAAGTTTAGTTTCCCTAACTTTGATGATTCTGTAGGACCTTCTGTTCAAGAATTTGGTCACCATGCAGGGTACTATCCACTTCCTCAATCAAAGGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTAGGAATAGTAAAGATGACCCTGTGGTTATATGGTTGACCGGAGGCCCAGGTTGCAGTAGTGAACTTGCTTTGTTTTATGAGAACGGTCCTTTTCAATTTTCCAAGAACTTGTCTCTTGTATGGAATGATTATGGTTGGGACAAGGCATCAAATATACTATTTGTAGACCAACCTACTGGTACAGGTTTCAGCTATACTTCTGATGACAATGATATTCGTCATGATGAAGAGGGTGTTAGTAATGATTTGTATGACTTCTTGCAGGCATTTTTCAAGGAGCATCCTCAGTTTGTGAAGAATGAGTTCTTTATTACTGGAGAATCATATGCTGGACATTACATTCCAGCTCTTGCATCCAGGGTACACCAAGGAAACAAAGCAAAACAAGGAGTTCATATAAATCTCAAGGGTTTTGCTATTGGTAATGGCTTAACCAATCCTGAAATCCAGTACCAAGCATATACAGACTATGCATTAGACAGAGGAATAATAAAAAAAGCTGATTATAACAGTATCAACAAGTTGCTTCCAGCATGTCAGAAAGCCATAAAAACTTGTGGCACTGAAGGTGGAGATACATGTGTATCTTCCAGGTATGTTTGCAATGACATATTCAACCAGATCATGTCCATTGCTGGTGACATTAATTACTATGACATTAGAAAGAAATGTGAGGGAAATCTGTGTTATGACTTCTCCAATGTGGAGAAATTCTTAAACAAGAAGACAGTGAGGGATGCATTAGGTGTGGGGGACTTGGACTTTGTTTCATGCAGTAGCACAGTATATGATGCCATGATGCAAGACTGGATGAGAAATCTAGAAGTGGGTATTCCGGCTCTTCTCGAGGACGGAATCAAGGTGCTTGTCTACGCCGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCTATGGAGTGGTCGGGTCAAAAAGAGTTCGAGGCATCTCCTACAGTCCCATTTTTAGTTGATGGTGCAGAAGCAGGAGAGCTGAAAAGCCATGGACCTCTCACTTTCCTAAAGGTAAATGAGGCTGGACATATGGTCCCTATGGACCAACCAAAAGCTGCACTTCAGATGCTAAGAAGTTGGACACAAGGGAAACTGGCCATGACAAGGAGTGGAGATAATGTCTCTCCTAATTGA 1512 0.4041 MCVSFLMLFSLIFVSTSMSASSYSTNNDLHFSSTPSLPKLQAENLIRGLNLFPKYTINTPLNDPHFVPGKIVEKKFSFPNFDDSVGPSVQEFGHHAGYYPLPQSKAARMFYFFFESRNSKDDPVVIWLTGGPGCSSELALFYENGPFQFSKNLSLVWNDYGWDKASNILFVDQPTGTGFSYTSDDNDIRHDEEGVSNDLYDFLQAFFKEHPQFVKNEFFITGESYAGHYIPALASRVHQGNKAKQGVHINLKGFAIGNGLTNPEIQYQAYTDYALDRGIIKKADYNSINKLLPACQKAIKTCGTEGGDTCVSSRYVCNDIFNQIMSIAGDINYYDIRKKCEGNLCYDFSNVEKFLNKKTVRDALGVGDLDFVSCSSTVYDAMMQDWMRNLEVGIPALLEDGIKVLVYAGEEDLICNWLGNSRWVHAMEWSGQKEFEASPTVPFLVDGAEAGELKSHGPLTFLKVNEAGHMVPMDQPKAALQMLRSWTQGKLAMTRSGDNVSPN 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal25g0199 503 SUPERFAMILY alpha/beta-Hydrolases 91 490 IPR029058 -
Lal25g0199 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Lal25g0199 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Lal25g0199 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Lal25g0199 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Lal25g0199 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 492 IPR001563 GO:0004185|GO:0006508
Lal25g0199 503 PANTHER SERINE CARBOXYPEPTIDASE 3 30 492 - -
Lal25g0199 503 Pfam Serine carboxypeptidase 90 488 IPR001563 GO:0004185|GO:0006508
Lal25g0199 503 Gene3D alpha/beta hydrolase 77 500 IPR029058 -
Lal25g0199 503 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal25g0199 Lal-Chr25 1354971 1359717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal25g0199 K16298 - gmx:100785987 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal25g0199 25 1354971 1359717 Lal25g0199 25 1354971 1359717 ECH
Lal25g0199 25 1354971 1359717 Lal1g0397 1 2431936 2434839 PCT
Lal9g0290 9 1851205 1854762 Lal25g0199 25 1354971 1359717 PCT