Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0397 ATGACATTCTTATCTCTCATTAAAATATATTTGTCTATTTCATTGTTCTTCTTTATTTTACCTTTATTCTCCTTATCGAGATCAACTTTTCCAATATCCAAACACCTCCATTCTTATTTACCAAAAACACAAGCTGAAAGTCTCATAAGAAGCTTTAACCTTTTTCCCAAATATAATGTTAACATAATAGCTTGTGACACTGCTTTTCTCCCCGGAAGTATTGTGGAGAACAAAGTATCATTTCTAGATGTTTCTCGGCCTTCTGTTCTGTTGAAGAGCTTGGTCACCATTCAGGATTTTACTCAATTCTTCATTCAAAAGCTGCAATGTAAGAATTATAAAAGATGCCCAGTTATTATATGGTTGACCGGAGGAGCAGGTTGCAGCAATTCTTTAGCATTGTTCTATGAAAATGATCCATTTAAAATTGCCAATAACATGTCTCTTGTATTGAATCAGTATGGTTGGGACAAGGCTTCAAATATTCTATTTGTAGATCAACCCACAGGTACACAGGTTTCAGCTACTCTAGCAATGAAGATGACATTCGACATGATGAAGTGGGTGTTAGCAATGATTTATATGATTTCTTGCAGGCTTTTTTTCAAGAAGCATACTGAATTGGTTAAGAATGACTTCTATATTACTGGAGAATCATATGCTAGACACTATATTCCGGCTCTTGCATCCTGGGTTCACAAGGGAAATATAAAAAAACAAGGGATTCATATAAATCTCAAGGGTTTTGCTATTGGTAATGAGTTAACCAACCCTGCGATTCAGTACAGAGCCTATAGTGACTTTGCATTACGGAGGGGATTAATTACAAAGAAAGATCAAGATAGTCTTAACAAACTTATCCCTAATTGTGAGCAAGACATGAAAAATTGCCAAACTGAAGGTGGAGATAGTTGTGGTTCTGCATATAAAACTTGCACTAACATATTCGACTATCTTTTGTCCATTATTGGTAAGAAAGGCACGCCAGATATCAGAAAGAAATGTGAGGGAGATATGTGCTATGACTTCTCAAATAATGATACTTTTTTGAACAATGACAAAGTGAAGGATGCTTTAGGAGTAAAAGATTTGGATTTTGTTTCATGTAGTAACACATTGTTCGATGATATGCTTGAGGATTGGATGAAAAATTTAGAAGTTGATATTCCTTCTCTTCTTGAGGATGGGATAAAATTGCTTGTGTATGTTGGTGAAGAAGATCTTATATGCAATTGGTTTGGTAATTATAGATGGGTTCGTGCTATGAAGTGGTCAGGCCAAAAAAAGTTTATGTCAGCATTAACAATCAAATTTATAGTTGATAGTGTTGAAGCAGGAGATTTAACAAGCTATGGACCTCTTTCATTCCTTAAGGTGTTTCAAGCTGGGCACATGGTTCCTATGGATCAACCTAAAGCTTCACTCGAAATGTTCACAAGGTGGATGGGAGGAAAACTTTATGGCTCTAAGAAATGA 1476 0.355 MTFLSLIKIYLSISLFFFILPLFSLSRSTFPISKHLHSYLPKTQAESLIRSFNLFPKYNVNIIACDTAFLPGSIVENKVSFLDVSRPSVLLKSLVTIQDFTQFFIQKLQCKNYKRCPVIIWLTGGAGCSNSLALFYENDPFKIANNMSLVLNQYGWDKASNILFVDQPTGTQVSATLAMKMTFDMMKWVLAMIYMISCRLFFKKHTELVKNDFYITGESYARHYIPALASWVHKGNIKKQGIHINLKGFAIGNELTNPAIQYRAYSDFALRRGLITKKDQDSLNKLIPNCEQDMKNCQTEGGDSCGSAYKTCTNIFDYLLSIIGKKGTPDIRKKCEGDMCYDFSNNDTFLNNDKVKDALGVKDLDFVSCSNTLFDDMLEDWMKNLEVDIPSLLEDGIKLLVYVGEEDLICNWFGNYRWVRAMKWSGQKKFMSALTIKFIVDSVEAGDLTSYGPLSFLKVFQAGHMVPMDQPKASLEMFTRWMGGKLYGSKK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0397 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 90 485 IPR001563 GO:0004185|GO:0006508
Lal1g0397 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 152 164 IPR001563 GO:0004185|GO:0006508
Lal1g0397 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 165 175 IPR001563 GO:0004185|GO:0006508
Lal1g0397 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 201 226 IPR001563 GO:0004185|GO:0006508
Lal1g0397 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Lal1g0397 491 ProSitePatterns Serine carboxypeptidases, histidine active site. 454 471 IPR033124 GO:0004185
Lal1g0397 491 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 90 485 - -
Lal1g0397 491 Pfam Serine carboxypeptidase 103 483 IPR001563 GO:0004185|GO:0006508
Lal1g0397 491 SUPERFAMILY alpha/beta-Hydrolases 100 485 IPR029058 -
Lal1g0397 491 Gene3D alpha/beta hydrolase 99 489 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0397 Lal-Chr1 2431936 2434839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0397 K16298 - gmx:100798795 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0397 1 2431936 2434839 Lal1g0397 1 2431936 2434839 ECH
Lal25g0199 25 1354971 1359717 Lal1g0397 1 2431936 2434839 PCT