Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal9g0290 ATGGCATCTTTATCTCTTATCAAAATCTCTTTCGCTCTTTCATTGTTCTTCTTCCTTTTACCTTCATCTTCTTCTTCAAGACTATCTTTTACAACAATTAAAAACCATCACCAATCTCTAACAACCAACTATGCCAAATCAGAAACAGAAAGACTCATAAGAAGCTTTAACCTATTCCCAGAAGATCTGGTTAACATAATAGACAATGAACCTGGTTTTACCCCTGGAAGTCTTGTGGAGAAGAAGTTTTCATTTCTAGGTGCTTCTGGGCCTTCTGTTGAAGACCTAGGTCACCATGCTGGGTATTATTCGCTTCCTCACTCCAAAGCCGCACGGATGTTTTACTTTTTCTTTGAATCTCGGACTAATAAAGATGACCCCGTTGTTATATGGTTAAGTGGAGGACCCGGTTGCAGCAGCTCAATAGCATTGTTCTATGAAAATGGCCCTTTTAAAATTGCAAAAAACTTTTCTCTGGTTTGGAATGACTATGGTTGGGACAAGGCTTCAAATATCTTGTTTATAGACCAACCCACAGGAACAGGTTTCAGCTATACAAGTGATGAAACTGACATTAGATCTGATGAAGCGGGTGTTAGCAATGATTTGTATGATTTCTTGCAGGCATTTTTCAAAGAACATCCTCAGTTCAGTAAGAACGAATTTTATATTACTGGAGAATCATACGCTGGACACTATATTCCAGCTCTTGCATCAAGAGTTCACAAAGGAAATAATGCTAAAGAAGGAATTCCTATAAATCTGAAGGGTTTTGCAATTGGTAATGGATTAACTAATCCTGGAGTTCAGTACCCAGCATATACTGACTACGCACTAGATAAAGGATTAATTACAAAGGGAGATCAAGATAGTATCAACAAGCTTATCCCAGATTGTAAACGAGCCACACAATCTTGTGAAACTAATGGTGGAGAAAGTTGTGAAGATGCACGTTACGCATGCCAGTCCATATTCGAGAGTATCTTGGCAATTACGGGAAACATTAATTACTATGATGTGAGAAAGCTATGTGATGGACAATTGTGTTATGACTTCTCATATGCGGTGAGCTTTTTGAACGACGAGAGGGTGAAGACTGCGTTAGGTGTGAAGAACTTGAAGTTTATTTCATGCAGTGAAACAGTGTACAGAGCTATGAGTAATGATTGGATGAAAAACTTAGAAGTTGATATTCCTTCTCTTCTTGAGGACGGGATAAGGATGCTTGTTTATGCTGGTGAAGAAGATCTTATATGCAATTGGCTTGGTAATTCAAGGTGGGTTCATGCTATGAAGTGGTCAGGTCAAAAGGGATTTAAGTCAGCAACTACAGTCAAATTTGTAGTTGATGGAGCTGCAGCTGGAGATTTGACAACCCATGAGGCTCTATCTTTCTTGAAGATTTATAAAGCTGGACATATGGTTCCAATGGATCAACCAAAAGCTGCACTTCAAATGCTGAAAGCTTGGATGGGAGGCAAACTTGCCTCTTAG 1494 0.3902 MASLSLIKISFALSLFFFLLPSSSSSRLSFTTIKNHHQSLTTNYAKSETERLIRSFNLFPEDLVNIIDNEPGFTPGSLVEKKFSFLGASGPSVEDLGHHAGYYSLPHSKAARMFYFFFESRTNKDDPVVIWLSGGPGCSSSIALFYENGPFKIAKNFSLVWNDYGWDKASNILFIDQPTGTGFSYTSDETDIRSDEAGVSNDLYDFLQAFFKEHPQFSKNEFYITGESYAGHYIPALASRVHKGNNAKEGIPINLKGFAIGNGLTNPGVQYPAYTDYALDKGLITKGDQDSINKLIPDCKRATQSCETNGGESCEDARYACQSIFESILAITGNINYYDVRKLCDGQLCYDFSYAVSFLNDERVKTALGVKNLKFISCSETVYRAMSNDWMKNLEVDIPSLLEDGIRMLVYAGEEDLICNWLGNSRWVHAMKWSGQKGFKSATTVKFVVDGAAAGDLTTHEALSFLKIYKAGHMVPMDQPKAALQMLKAWMGGKLAS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal9g0290 497 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 41 493 - -
Lal9g0290 497 Pfam Serine carboxypeptidase 95 492 IPR001563 GO:0004185|GO:0006508
Lal9g0290 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Lal9g0290 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Lal9g0290 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Lal9g0290 497 PRINTS Carboxypeptidase C serine protease (S10) family signature 463 476 IPR001563 GO:0004185|GO:0006508
Lal9g0290 497 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Lal9g0290 497 SUPERFAMILY alpha/beta-Hydrolases 97 494 IPR029058 -
Lal9g0290 497 Gene3D alpha/beta hydrolase 82 496 IPR029058 -
Lal9g0290 497 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 493 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal9g0290 Lal-Chr9 1851205 1854762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal9g0290 K16298 - gmx:100798795 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0290 9 1851205 1854762 Lal9g0290 9 1851205 1854762 ECH
Lal9g0290 9 1851205 1854762 Lal25g0199 25 1354971 1359717 PCT