Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0946 ATGGGTTCGTCGCTATCGAACCTTGGCACGAACGGTTCCATCATTGTGCCGGGCCTCGGCGACATACCGGAGAGCTGTGTGGCCTGCGTCTTCCTCTACCTCACGCCGCCGGAGATTTGCAACCTTGCGCGGCTTAACCGTGCTTTTCGCGGTGCCGCTTCCGCCGATTCTGTTTGGGAAACAAAGTTGCCGCATAACTACCTAGATCTGCTTGAATTGGTTCCTCCTGAGAGGCACCAGAATCTTTGCAAAAAGGACATTTTCGCGCTATTGTCGAAACCGTTATCGTTCGATGATGGAAATAAGGTGGGTGCTCTTCAGGAAGTGTGGCTGGACAGGGTCACCGGATGGGTTTGCATGGCCATTTCGGCAAGAGCGATGTCAATTACTGGAATTGATGACAGGAGATACTGGAATTGGATTCCTACCGAAGAATCTAGGTTAGATTCATAA 453 0.5121 MGSSLSNLGTNGSIIVPGLGDIPESCVACVFLYLTPPEICNLARLNRAFRGAASADSVWETKLPHNYLDLLELVPPERHQNLCKKDIFALLSKPLSFDDGNKVGALQEVWLDRVTGWVCMAISARAMSITGIDDRRYWNWIPTEESRLDS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0946 150 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Lal24g0946 150 SUPERFAMILY F-box domain 17 76 IPR036047 GO:0005515
Lal24g0946 150 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 148 - -
Lal24g0946 150 Pfam Phloem protein 2 118 148 IPR025886 -
Lal24g0946 150 PANTHER F-BOX PROTEIN PP2-A15 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0946 Lal-Chr24 7924937 7930634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0946 - - vra:106772440 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1036 12 9603323 9607692 Lal24g0946 24 7924937 7930634 LSH
Lal1g1782 1 20192169 20195112 Lal24g0946 24 7924937 7930634 PCT
Lal24g0946 24 7924937 7930634 Lal1g1782 1 20192169 20195112 PCT