Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g1036 ATGGGTTCGTCACTATCGAACCTAGGCACAAACGGTTCGACCATTGGTCCGGGCCTCGGAGACATACCTGAGTGCTGCGTGGCCTGCGTCTTCCTCTACCTGACGCCGCCGGAGATTTGCAACCTTGCGCGGCTAAACCGTGCTTTTCGCGGCGCCGCTTCGGCCGACTCCGTTTGGGAAACAAAGTTGCCGCATAACTACCAAGATCTGCTGGAGTTGGTTCCTCACGAAACGCACCAGAATCTTTGCAAGAAGGATATTTTCGCGCTGCTTTCCAAACCGTTGTCGTTTGATGACGGCAATAAGGAAGTGTGGCTGGATATGGTCACTGGAAGAGTTTGCATGGCTATTTCGGCGAAAGCCATGGCAATTACTGGAGTTGATGACAGGAGGTACTGGAATTGGATTCCTACTGAAGAATCAAGGTTCCAAACTGTGGCATATTTGCAGCAAATATGGTGGTTTGAAGTGGACGTGGAGGTAAAGTTTCCATTTCCGGCTGGTGTTTATTCTCTCTACTTTAGGCTTCACCTTGGACGTTTTTCCAAAAGACTTGGACGGCGTGTATGCAATTATGAACACACTCATGGTTGGGAAATAAAACCTGTGAAATTTATGTTGTCTGCTTCAGATGGTCAGGAAGCATCATGTGAGTTCTGTTTGGATGAAACTGAGCTCGATGATGCACATGGCAATCATAAGCGTGGATACTGGGTAGAATACAAGGTCGGCGAGTTTATAGTCAGTGGACCAAAACATACAACTGAAGTTACATTCTCCATGAAACAGATTGATTGTACACATTCCAAAGGCGGGCTTTGTGTAGATTCTGTATTCATCATTCCGAGTGATTTGAGAGACACAAGAGAAGAGGAATCTTGA 882 0.4683 MGSSLSNLGTNGSTIGPGLGDIPECCVACVFLYLTPPEICNLARLNRAFRGAASADSVWETKLPHNYQDLLELVPHETHQNLCKKDIFALLSKPLSFDDGNKEVWLDMVTGRVCMAISAKAMAITGVDDRRYWNWIPTEESRFQTVAYLQQIWWFEVDVEVKFPFPAGVYSLYFRLHLGRFSKRLGRRVCNYEHTHGWEIKPVKFMLSASDGQEASCEFCLDETELDDAHGNHKRGYWVEYKVGEFIVSGPKHTTEVTFSMKQIDCTHSKGGLCVDSVFIIPSDLRDTREEES 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g1036 293 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 289 - -
Lal12g1036 293 PANTHER F-BOX PROTEIN PP2-A15 1 289 - -
Lal12g1036 293 Pfam Phloem protein 2 113 282 IPR025886 -
Lal12g1036 293 SUPERFAMILY F-box domain 17 74 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g1036 Lal-Chr12 9603323 9607692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g1036 - - vra:106772440 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g1036 12 9603323 9607692 Lal12g1036 12 9603323 9607692 ECH
Lal12g1036 12 9603323 9607692 Lal24g0946 24 7924937 7930634 LSH
Lal1g1782 1 20192169 20195112 Lal12g1036 12 9603323 9607692 PCT
Lal12g1036 12 9603323 9607692 Lal1g1782 1 20192169 20195112 PCT