Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1782 ATGGGAGCGTCGCTCTCCAACGCTTCAACCAACGCTTCCACCGCCGTCGGTTCTACTCTCGGCGACATACCGGAGAGTTGCGTCGCCGGCGTTCTCCCTCACCTTACTCCGCCGGAGATTTGCAATTTAGCGCGCCTCAATCGCGCGTTTCGCGGTGCCGCTTCGTCAAATTCGGTATGGGAAAGTAAATTACCTTGTAACTATCAACAATTGTTGGATATAATAATGCCTTCTCATCAGAGGTATCACAATTTGTCCATGAAAGACATTTTTGCATTGCTATCTCGTCCGCTTCCATTTCATGATGGTAACAAGGAAGTGTGGCTGCACAAGGTCACGGGAAGAGTTTGCATGTCAATTTCTGCGAAAGCCATGTCAATTACTGGAATTGATGACCGCAGATACTGGACTTGGATTCCTACTGAAGAATCTAGGTTCAATACTGTAGCATATTTGCAGGAAATATGGTGGTTTGAAGTAGACGGGGAGGTCAAGTTTCCATTTCCTGCTGATACATATACTCTCTCCTTTAGGATTCACCTTGGACGGTTTTCCAAAAGGCTTGGACGCCGTGTATGCAATTATGAACAGACCCATGGCTGGGATATAAAACCGGTGAGGTTTGAATTCTCTACTTCAGATGGTCAGCGATCAATCAGTGAGTACTTCTTGGATGAAACTGAACACATTGATGCCTACGGTGATTATAAGCGCAGAAACTGGGTAGATTACAAGGTGGGTGAGTTTATTGTAAATGGATCAGAACCTATAACTGAAGTTAGATTCTCCATGAAACAGATTGATTGTACACACTCTAAAGGTGGGCTTTGTGTAGATTCTGTATTTATTATACCCACAGGTCTGAGAGAGCGCAAACGAAGCGGCATCTTGAAGTAG 897 0.4493 MGASLSNASTNASTAVGSTLGDIPESCVAGVLPHLTPPEICNLARLNRAFRGAASSNSVWESKLPCNYQQLLDIIMPSHQRYHNLSMKDIFALLSRPLPFHDGNKEVWLHKVTGRVCMSISAKAMSITGIDDRRYWTWIPTEESRFNTVAYLQEIWWFEVDGEVKFPFPADTYTLSFRIHLGRFSKRLGRRVCNYEQTHGWDIKPVRFEFSTSDGQRSISEYFLDETEHIDAYGDYKRRNWVDYKVGEFIVNGSEPITEVRFSMKQIDCTHSKGGLCVDSVFIIPTGLRERKRSGILK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1782 298 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 293 - -
Lal1g1782 298 PANTHER F-BOX PROTEIN PP2-A15 1 293 - -
Lal1g1782 298 SUPERFAMILY F-box domain 17 89 IPR036047 GO:0005515
Lal1g1782 298 Pfam Phloem protein 2 116 285 IPR025886 -
Lal1g1782 298 ProSiteProfiles F-box domain profile. 17 63 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1782 Lal-Chr1 20192169 20195112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1782 - - gmx:100807328 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1782 1 20192169 20195112 Lal1g1782 1 20192169 20195112 ECH
Lal1g1782 1 20192169 20195112 Lal12g1036 12 9603323 9607692 PCT
Lal1g1782 1 20192169 20195112 Lal24g0946 24 7924937 7930634 PCT
Lal12g1036 12 9603323 9607692 Lal1g1782 1 20192169 20195112 PCT
Lal24g0946 24 7924937 7930634 Lal1g1782 1 20192169 20195112 PCT