Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0827 ATGTCTCCACCGATTGAAACCCCAGAGAAGTTTACCATATCTCATAACTCCTCACATCCACCATTGAATGAGAGGATTCTTTCATCAATGACAAGGAGATCGGTTGCTGCACACCCCTGGCATGATCTTGAGATAGGACCTGAAGCTCCAAAGATCTTCAATTGTGTGATTGAAATTGGTAAAGGAAGCAAAGTGAAATATGAACTTGATAAAAAAACTGGACTGATTATGGTCGACCGTGTGCTTTACTCATCAGTTGTGTATCCTCACAACTATGGGTTTATCCCTCGTACTATTTGTGAGGACAGCGACCCCATCGATGTCTTGATTATCATGCAGGAGCCAGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCCATTGGACTCATGCCTATGATTGATCAGGGTGAGAAAGATGACAAGATCATTGCTGTCTGTGCTGATGATCCCGAGTACCGACATTATAATGACATAAAGGAGCTTCCACCACATCGTTTAGCTGAAATTCGTCGGTTTTTTGAAGACTGTATCCTTATAAAACTAGAATTAGATAAGAAGAATGAGAACAAGGAAGTTGCAGTAAATGACTTTCTTCCTGCCTCCTCTGCCTATGAAGCGATCCAGCACTCAATGACCCTGTATGCGGATTACATTGTGGAGGGCTTGAGAAGATAG 675 0.4281 MSPPIETPEKFTISHNSSHPPLNERILSSMTRRSVAAHPWHDLEIGPEAPKIFNCVIEIGKGSKVKYELDKKTGLIMVDRVLYSSVVYPHNYGFIPRTICEDSDPIDVLIIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDCILIKLELDKKNENKEVAVNDFLPASSAYEAIQHSMTLYADYIVEGLRR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0827 224 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
Lal24g0827 224 PANTHER INORGANIC PYROPHOSPHATASE 22 224 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal24g0827 224 Gene3D Inorganic pyrophosphatase 34 220 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal24g0827 224 CDD pyrophosphatase 52 211 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal24g0827 224 PANTHER BNAC07G03580D PROTEIN 22 224 - -
Lal24g0827 224 SUPERFAMILY Inorganic pyrophosphatase 31 218 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal24g0827 224 Pfam Inorganic pyrophosphatase 55 214 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal24g0827 224 Hamap Inorganic pyrophosphatase [ppa]. 51 215 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0827 Lal-Chr24 6563943 6567626 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0827 K01507 - pop:7454911 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1119 11 14946021 14952658 Lal24g0827 24 6563943 6567626 PCT
Lal20g0061 20 409115 413830 Lal24g0827 24 6563943 6567626 PCT
Lal24g0827 24 6563943 6567626 Lal11g1119 11 14946021 14952658 PCT
Lal24g0827 24 6563943 6567626 Lal20g0061 20 409115 413830 PCT