Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1119 ATGTCTAAAATCGTGGTTGATACCGAATTTGATGGAGAAATTGCAGCAAAAGTTGTTCCACTTGTTGCGGGTCGAGACAAGACTGCAAATGTGGTTCCAGCCACTGAAACTGCAAACAAGGTTCCCACCTATGATTACTCCTCACACCCACCTCTAAATGAGAGGATTATCTCATCCATGATCAGGAGGTCTACTGCTGCACATCCTTGGCATGACCTTGAGATAGGACCTGGAGCTCCACAGACCTTCAACTGTGTGATTGAAATTGCTAAAGGGAGCAAGGTGAAATATGAACTTGACAAAAAAACTGGACTTATTAAGGTCGATCGTGTACTTTACTCATCCGTTGTGTATCCCCACAACTATGGCTTTATCCCACGTACTCTTTGTGAGGACAGTGATCCTCTTGATGTCCTGGTTATTATGCAGGAGCCAGTTCTTCCAGGTTGCTTTCTTCGGGCCAAAGCTATTGGTCTCATGCCCATGATTGATCAGGGTGAGAAAGATGACAAAATCATTGCAGTCTGTGCTGATGATCCCGAGTATCGACATTACAATGATATCAAGGAGCTTCCCCCACATCGTTTAGCCGAAATTCGTCGATTTTTTGAAGATTACAAGAAGAATGAGAACAAAGAAGTTGCAGTCAACGACTTTTTGCCTGCCTCAACTGCTTTTGAAGTTATCAAGCACTCCATGACCCTTTATGCTGACTACATAGTGGAGAGCTTGAGGCGCTAG 741 0.4413 MSKIVVDTEFDGEIAAKVVPLVAGRDKTANVVPATETANKVPTYDYSSHPPLNERIISSMIRRSTAAHPWHDLEIGPGAPQTFNCVIEIAKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASTAFEVIKHSMTLYADYIVESLRR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1119 246 PANTHER BNAC07G03580D PROTEIN 52 245 - -
Lal11g1119 246 Hamap Inorganic pyrophosphatase [ppa]. 81 237 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal11g1119 246 SUPERFAMILY Inorganic pyrophosphatase 63 241 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal11g1119 246 Pfam Inorganic pyrophosphatase 85 236 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal11g1119 246 ProSitePatterns Inorganic pyrophosphatase signature. 132 138 - -
Lal11g1119 246 PANTHER INORGANIC PYROPHOSPHATASE 52 245 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal11g1119 246 CDD pyrophosphatase 81 233 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lal11g1119 246 Gene3D Inorganic pyrophosphatase 64 242 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1119 Lal-Chr11 14946021 14952658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1119 K01507 - gmx:100784203 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1119 11 14946021 14952658 Lal20g0061 20 409115 413830 LSH
Lal11g1119 11 14946021 14952658 Lal24g0827 24 6563943 6567626 PCT
Lal24g0827 24 6563943 6567626 Lal11g1119 11 14946021 14952658 PCT