Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0786 ATGGATTCAATTCAAGAATTTATGGACTCAGACAACAACAACACCTGCAACCTCACCAACAGTATCACCAACAACAACAACAACAACTTAGTTGGTAGTGGCTCTAACTCATTTGGTAGTTCTAATTCACCATCTGGTTCTTCCACCAACACTAGCAGCCGCTATGAGAACCAGAAGCGCCGTGACTGGAACACCTTTGGCCAATACCTCAAGAACCACCGTCCCCCTCTTTCCCTCTCCAGGTGTAGCGGTGCTCATGTTCTAGAGTTTCTCCGGTACTTGGACCAATTTGGAAAGACCAAAGTCCACACTCCGATCTGTCCATTTTATGGTCATCCTAACCCTCCAGCACCATGTCCATGCCCTCTTCGACAAGCCTGGGGTAGCCTCGATGCCCTCATCGGTCGTCTTCGCGCCGCTTTCGAAGAAAATGGAGGAAAGCCTGATACCAATCCATTTGGTGCTCGAGCTGTGAGGCTCTACCTTCGTGAGGTTCGTGATTTGCAGTCCAAAGCAAGAGGGATTAGTTATGAGAAGAAGAAGCGTAAACGCCCCTTACCACAACAACAACAACAACAGCAGCAGCAACAACAACAACCACAATCAATTTCTCTAGCATCTCCTTTTAATCATCACCACCAGCTTCCGCCACCTTCAGGTGCAACTCAATAA 672 0.4792 MDSIQEFMDSDNNNTCNLTNSITNNNNNNLVGSGSNSFGSSNSPSGSSTNTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPDTNPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPLPQQQQQQQQQQQQPQSISLASPFNHHHQLPPPSGATQ 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0786 223 ProSiteProfiles ALOG domain profile. 54 181 IPR006936 -
Lal24g0786 223 PANTHER PROTEIN G1-LIKE2 1 221 IPR040222 -
Lal24g0786 223 Pfam ALOG domain 48 167 IPR006936 -
Lal24g0786 223 MobiDBLite consensus disorder prediction 187 209 - -
Lal24g0786 223 MobiDBLite consensus disorder prediction 27 58 - -
Lal24g0786 223 PANTHER G1-LIKE PROTEIN 1 221 - -
Lal24g0786 223 MobiDBLite consensus disorder prediction 172 223 - -
Lal24g0786 223 MobiDBLite consensus disorder prediction 27 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0786 Lal-Chr24 6114275 6115933 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0786 - - gmx:100803605 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0786 24 6114275 6115933 Lal24g0786 24 6114275 6115933 ECH
Lal24g0786 24 6114275 6115933 Lal13g0724 13 4738370 4739953 ECH
Lal24g0786 24 6114275 6115933 Lal13g1032 13 7581523 7585380 ECH
Lal24g0786 24 6114275 6115933 Lal20g0029 20 210589 212210 ECH
Lal12g0711 12 5364627 5366294 Lal24g0786 24 6114275 6115933 ECH
Lal13g1032 13 7581523 7585380 Lal24g0786 24 6114275 6115933 LSH
Lal5g0012 5 223860 224399 Lal24g0786 24 6114275 6115933 PCT
Lal24g0786 24 6114275 6115933 Lal20g0029 20 210589 212210 PCT