Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal5g0012 ATGGATTTGACTTCAGATGAATCATCAAACCCCAGCTACAAGACTGAGAGTAGTTTAATGACTCAAACCACACCATCATCATCTTCATCTTCTCCAATATCTTCAGCTTCTAACAGCACTCCAAACCGCTATGAGAATCAAAAGAGGAGAGACTGGAACACTTTCTGTCAATACCTAAGGAGCCAGAAGCCACCTCTTCCATTACACTTATGTAGTGGAGCTCATGTTCTAGAGTTCCTCCAATACCTTGACCAGTTTGGGAAGACTAAAGTACATAACCCAACGTGCCCTTACTTTGGGATAACTAACCCTCCAGCATCATGCCCTTGCTCTTTACGCCAGGCTTGGGGTAGCCTTGATGCACTAATAGGGCGCCTTCGTGCAGCATATGAAGAGAATGGAGGACAGCGTGAGACTAATCCCTTTGCTGCTTCAGATGTGAGGGCTTACTTGCGTGATGTTCGTGATTTTCAATCAAAGGCTAGAGGTGTTAGCTATCAGAAGAAGAGGAAGAGGCCAAAGCCTAATAGTAATGGTTGA 540 0.4481 MDLTSDESSNPSYKTESSLMTQTTPSSSSSSPISSASNSTPNRYENQKRRDWNTFCQYLRSQKPPLPLHLCSGAHVLEFLQYLDQFGKTKVHNPTCPYFGITNPPASCPCSLRQAWGSLDALIGRLRAAYEENGGQRETNPFAASDVRAYLRDVRDFQSKARGVSYQKKRKRPKPNSNG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal5g0012 179 MobiDBLite consensus disorder prediction 1 46 - -
Lal5g0012 179 MobiDBLite consensus disorder prediction 164 179 - -
Lal5g0012 179 Pfam ALOG domain 36 156 IPR006936 -
Lal5g0012 179 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 12 175 - -
Lal5g0012 179 PANTHER PROTEIN G1-LIKE2 12 175 IPR040222 -
Lal5g0012 179 MobiDBLite consensus disorder prediction 1 43 - -
Lal5g0012 179 ProSiteProfiles ALOG domain profile. 43 170 IPR006936 -
Lal5g0012 179 MobiDBLite consensus disorder prediction 160 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal5g0012 Lal-Chr5 223860 224399 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal5g0012 - - gmx:102663941 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal5g0012 5 223860 224399 Lal13g1032 13 7581523 7585380 PCT
Lal5g0012 5 223860 224399 Lal24g0786 24 6114275 6115933 PCT