Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal20g0029 ATGGATTCATTTCAACAATTTATGGATACATGTAACTCTGAACACAACCTCACAAATAACACTATCACAAGCACCAAGATAACTACAAGCTTTGGAGCTGCTAGTGCTAGCTCTTCCTCACCTCCGGCCACCAGCAGCCGCTATGAGAACCAGAAGCGCCGTGACTGGAACACCTTTGGACAGTACCTCAAGAATCACCGTCCCCCTCTTTCACTCTCTAGGTGCAGCGGTGCAAATGTTCTTGAATTTCTCAGGTACCTAGACCAATTTGGGAAGACCAAAGTTCACACTCCAATCTGTCCCTTCTATGGACACCCTAACCCTCCAGGTCCATGTCCATGCCCTTTGAGACAAGCATGGGGTAGTCTTGATGCACTCATAGGTCGTCTCCGTGCAGCTTTTGAGGAAAATGGAGGGAAGCCTGAAGCAAATCCATTTGGTGCTCGAGCTGTGAGGCTTTACCTTCATGAGGTTCGTGACCTTCAGTCCAAAGCTAGAGGCATTAGTTATGAGAAGAAGAAGAAGCGGAAGCGACCACCGCAACAACAACCCATGCTCCCACCTCCACCAACTGCAACTCAATAA 585 0.4838 MDSFQQFMDTCNSEHNLTNNTITSTKITTSFGAASASSSSPPATSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGANVLEFLRYLDQFGKTKVHTPICPFYGHPNPPGPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLHEVRDLQSKARGISYEKKKKRKRPPQQQPMLPPPPTATQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal20g0029 194 MobiDBLite consensus disorder prediction 32 47 - -
Lal20g0029 194 MobiDBLite consensus disorder prediction 165 194 - -
Lal20g0029 194 ProSiteProfiles ALOG domain profile. 47 174 IPR006936 -
Lal20g0029 194 PANTHER PROTEIN G1-LIKE2 1 185 IPR040222 -
Lal20g0029 194 PANTHER G1-LIKE PROTEIN 1 185 - -
Lal20g0029 194 Pfam ALOG domain 37 160 IPR006936 -
Lal20g0029 194 MobiDBLite consensus disorder prediction 32 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal20g0029 Lal-Chr20 210589 212210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal20g0029 - - gmx:100803605 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0029 20 210589 212210 Lal13g0724 13 4738370 4739953 ECH
Lal20g0029 20 210589 212210 Lal20g0029 20 210589 212210 ECH
Lal24g0786 24 6114275 6115933 Lal20g0029 20 210589 212210 ECH
Lal12g0711 12 5364627 5366294 Lal20g0029 20 210589 212210 ECH
Lal20g0029 20 210589 212210 Lal2g1159 2 8388440 8389977 PCT
Lal13g1032 13 7581523 7585380 Lal20g0029 20 210589 212210 PCT
Lal24g0786 24 6114275 6115933 Lal20g0029 20 210589 212210 PCT