Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0614 ATGGCTTCTTCCTGGTCAGCAGAAAATGCCACAAAGGCCTATCTCAACACTTTGAAAATGGGTCAAAAGACTAGAGAACCAAATGTGGCTGAGTTTATATCAGCATTAGCAGCTGGAAACAATGCACAAGTGATGGTTATGGCATGTGCTGGTGCAGCAGATTCCACTACACTAGCTTTAGTAGCTGCAGCTCATCAAACTGGTGGCAAAGTCATTTGCATTGTGAGTAGCCATAAAGACCTAAATGCCTCCAAAAGTGCTTTAGGAATTCTTGCTCTTAAAGTCCAATTCATTGTTGGACAAGCTCAACAACTTCTATTAGACCTATATGATGCTGCAGATTTTGTGCTCATTGATTGTGACCTTGATAGCCATGAAGAGATTCTTAAATCAGTTCAAAAGGGTAGTAGGAAGAATAATGGCACAGTGGTTGTTGGATACAATGCATTTAGATGTAGAGGGTCATGGTGTTCATGTGGCTCAAAAACTCAGTTGTTGCCTATAGGTGAAGGGCTTTTGGTAACTAGGTTTGGAGCAAGTGATGGTAGTCCAAAATATGGTAGCAGAATGAGGAACACCAAAAGTCATTGGATTGTTAAGGTAGATAAATGCACTGGAGAGGAGCATGTGTTTAGGGTTAGATTTCCACAAGGGAAAGTCATTCAAGCTTAA 672 0.4092 MASSWSAENATKAYLNTLKMGQKTREPNVAEFISALAAGNNAQVMVMACAGAADSTTLALVAAAHQTGGKVICIVSSHKDLNASKSALGILALKVQFIVGQAQQLLLDLYDAADFVLIDCDLDSHEEILKSVQKGSRKNNGTVVVGYNAFRCRGSWCSCGSKTQLLPIGEGLLVTRFGASDGSPKYGSRMRNTKSHWIVKVDKCTGEEHVFRVRFPQGKVIQA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0614 223 Gene3D Vaccinia Virus protein VP39 3 178 IPR029063 -
Lal24g0614 223 PANTHER DUF1442 FAMILY PROTEIN 4 223 IPR009902 -
Lal24g0614 223 Pfam Protein of unknown function (DUF1442) 4 212 IPR009902 -
Lal24g0614 223 PANTHER BNAA09G06020D PROTEIN 4 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0614 Lal-Chr24 4479759 4480827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0614 - - gmx:100816283 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0794 13 5274621 5275950 Lal24g0614 24 4479759 4480827 LSH
Lal1g0787 1 5331888 5332424 Lal24g0614 24 4479759 4480827 PCT
Lal24g0614 24 4479759 4480827 Lal1g0787 1 5331888 5332424 PCT