Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0794 ATGGCTTGCTGGTCTGCAGAAAATGCCACAAAGGCCTATCTCAGCACTTTGAAAATGGGTCAAAAGACTAAAGAGCCAAACGTGGCAGAATTTATATCAGCACTAGCAGCTGGAAAAAATGCACAAGTGATGGTTATGGCATGTGCTGGTGCAGCAGATTCCACCACACTAGCCTTAGTAGCTGCTGCTCATCAAACTGGTGGCCAAGTCATTTGCATTGTGAGTGGCCATAAAGAGCTGAATGACTCCAAAAGTGCTTTAGGAGATGCTGCTTATCAAGTTCACTTCATGGTTGGAGAGGCTCAACAACTTCTACTAGACCAATATGAGGCAGCAGATTTTGTGCTCATTGATTGTAACCTTGATAGCCATGAAGAGATTCTTAAAGCAGTTCAAGAGGGTAGGAAGCAAAATGGCACAGTGGTTGTAGGGTACAATGCATTTAAATGTAGAGAGTCATGGTGTTCATGTGGCTCAAAAACTCAGTTGCTGCCTATAGGTGAAGGGCTTCTGGTGACAAGATTTGGTGCAAATGATTCTAGTCCAAAATATAGAAGCAGAATGGGGAAGACCAAAAGCCATTGGGTTGTGAAAGTAGATAAATGCACAGGAGAGGAACATGTGTTTAGGGTCAGATTTCCACAAGGGAAAGTGATTCAGGCTTAA 666 0.4324 MACWSAENATKAYLSTLKMGQKTKEPNVAEFISALAAGKNAQVMVMACAGAADSTTLALVAAAHQTGGQVICIVSGHKELNDSKSALGDAAYQVHFMVGEAQQLLLDQYEAADFVLIDCNLDSHEEILKAVQEGRKQNGTVVVGYNAFKCRESWCSCGSKTQLLPIGEGLLVTRFGANDSSPKYRSRMGKTKSHWVVKVDKCTGEEHVFRVRFPQGKVIQA 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0794 221 Pfam Protein of unknown function (DUF1442) 3 210 IPR009902 -
Lal13g0794 221 Gene3D Vaccinia Virus protein VP39 5 174 IPR029063 -
Lal13g0794 221 PANTHER BNAA09G06020D PROTEIN 1 221 - -
Lal13g0794 221 PANTHER DUF1442 FAMILY PROTEIN 1 221 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0794 Lal-Chr13 5274621 5275950 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0794 - - gmx:100816283 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0794 13 5274621 5275950 Lal24g0614 24 4479759 4480827 LSH
Lal1g0787 1 5331888 5332424 Lal13g0794 13 5274621 5275950 PCT
Lal13g0794 13 5274621 5275950 Lal1g0787 1 5331888 5332424 PCT