Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g0787 ATGGTTGTAGCATGTGCTAGTGTTGCAGACTCAACAACCTTAGCCTTAGTTGCCGCTGCTAATCAAACTGGTGGTAATGTTGTTTGTATTGTTCGCGGCGATGAAGAACGAAAAGCGTCGAAAAATGTCCTAGGAGTATCTGCCAGTAAAGTTCACTTCATTGTTGGAGAAGCAAAAGATCTTCTTTTAGACCAATATGATGCAGCAGATTTTGTGCTAATTGATTGTACTCTTGTTAACCATGAAGAGATTTTTAGAGCTGTGCAACATAGAAATCAAAATGGCAAAGTGGTTATTGGTTACAATGCATTTAGATGCAAAGGGTCTTGGAGGTTATGTGGATCAAAAACTCAGTTGCTGCCAATTGGAGAAGGGCTTTTGGTGACTAGAAGTAGAGCAAATTTCACTACTAGTCCTAAATATGGACCTGAAATGAGGAAGAATAGAAGTCATTGGGTTAAAAGGGTAGATAAATGCACTGGAGAAGAACATGTTTACAGGATCAGATTTCAACCAGGGAGAGTAATTCAAGCTTAG 537 0.3929 MVVACASVADSTTLALVAAANQTGGNVVCIVRGDEERKASKNVLGVSASKVHFIVGEAKDLLLDQYDAADFVLIDCTLVNHEEIFRAVQHRNQNGKVVIGYNAFRCKGSWRLCGSKTQLLPIGEGLLVTRSRANFTTSPKYGPEMRKNRSHWVKRVDKCTGEEHVYRIRFQPGRVIQA 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g0787 178 PANTHER DUF1442 FAMILY PROTEIN 1 177 IPR009902 -
Lal1g0787 178 PANTHER BNAA09G06020D PROTEIN 1 177 - -
Lal1g0787 178 Gene3D Vaccinia Virus protein VP39 11 137 IPR029063 -
Lal1g0787 178 Pfam Protein of unknown function (DUF1442) 12 167 IPR009902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g0787 Lal-Chr1 5331888 5332424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g0787 - - gmx:100816283 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g0787 1 5331888 5332424 Lal1g0787 1 5331888 5332424 ECH
Lal1g0787 1 5331888 5332424 Lal13g0794 13 5274621 5275950 PCT
Lal1g0787 1 5331888 5332424 Lal24g0614 24 4479759 4480827 PCT
Lal13g0794 13 5274621 5275950 Lal1g0787 1 5331888 5332424 PCT
Lal24g0614 24 4479759 4480827 Lal1g0787 1 5331888 5332424 PCT