Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0461 ATGTGTTTCATCAACACCATTTCCTTCTTGTCTCAATCTCTCCACTTCTCGAGAATGGAAAACGAAGAAGAACACAAGCCTATTATCCAATGGAAGAAACAAAAGGGTGGATTCAGGGCTTCAATGTTTATCTTTGTGTTATCAGCATTGGATAACATGGGATTTGTGGCAAACATGGTGAGCATAGTCCTATACTTTTATATGGTGATGCACTTTGATCTGGCTAGCTCAGCAAATACTCTCACAAATTTTATGGGTTCAACTTTCTTGCTCTCTCTTGTTGGTGGATTCATCTCAGATACTTATTTGAATAGACTAACCACATGCTTGATTTTTGGATCACTCGAAGTTCTGGCTTTGGTATTGCTCACAATTCAAGCTGCTTTACCAAAATTACACCCAGATGCTTGTGGAAAATCAAGCTGTGTCAAAGGTGGCATAGCAGTTATGTTTTATGCATCATTGTATATGTTGGCATTGGGTAATGGGGGAGTGAAAGGGTCTATGACTGCATTTGGTGCTGACCAATTTGATGAAAAGGACCCAAATGATGCAAAATCTCTTGCAACTTTCTTCAATTGGCTTGTGTTGAGTTCAACTTTGGGTTCAGTTATTGGAGTTACTGGTGTTGTGTGGGTTAGCACACAAATAGATTGGTATTGGGGCTTTTTTATAATAACTTTAGCTTCCTCACTTGGTTATGTTATTCTTGCTCTTGGGAAACCATCTTACCGCATCAAAAGTCCTGGTGAAAGCCCCATTTTGAGAATTACTCAGGTTATTGTTGTGGCTTTTAAGAACAGAAAACTAACACTGCCAGAGTCTAATGAAGAACTATATGAGATTAGTGCTGAAGATGGTACTGTAGAGAAAGTTGCACATACCAACCAAATGAGGTTTCTAGATAAAGCAACCATTCTTCAAGAAAACTTTGAACCTAAGCCATGGAAGGTATGCACAGTGACACAAGTTGAAGAAGTGAAGATTCTAACTAGAATGTTACCCATACTAGCCAGTACCATTATAATGAACACTTGTTTAGCACAGCTTCAAACATTCTCAGTCCAACAAGGGAGTATAATGAAACTAAAACTTGGTTCTTTTACAGTTCCCTCACCATCCATTCCTGTTATCCCACTTATTTTCTTGTGCATCTTGATTCCTATTTATGAGTTCTTCTTTGTACCACTTGCAAGAAAGATCACCCACCACCCTTCAGGTATTACACAACTTCAAAGAGTAGGTGTAGGACTAGTACTTTCTTCCATTTCAATGGCAATTGCAGGGGTTATAGAAGTAAAAAGAAGGGACCAGAGCAGAAAAGATTCATCACATCCCATAAGTCTATTTTGGCTATCATTCCAATATGCTATATTTGGAATTGCAGATATGTTCACTCTTGTAGGACTCCTAGAATTCTTCTACAGGGAAGCACCTTCAAACATGAAATCATTGTCAACTTCTTTCACATATTTATCTCTGTCACTTGGTTACTTCTTAAGCACGGTCTTCGTCGATGTTATAAACAGCGTTACGAAGAGAATGACTCCAAGCAAAAAAGGATGGTTGCATGGATCTGACTTAAACCAAAGCAATCTAAACTTGTTCTTTTGGTTCTTAGCAATCCTTAGCTGCCTCAATTTTTTCAACTTCCTTTACTGGGCATCTTGGTACAAGTACAAATCTGAAGACAACAATGCTGAAACAAAAACAACCTTAAAAATGGTTGATGAGAAGAAAACCAAGAAGGATGAAAGCATCAAAGATATTATGAGAGGTAAAGCTAAAGAAAGTAGCCAAACAAGTGAAGCCAATAGTGAGGGACCCTCTTCCTCTGATGAAACAGATGAAGGCAAAGAAAAAGAAGGAAACTATAGATAA 1881 0.3812 MCFINTISFLSQSLHFSRMENEEEHKPIIQWKKQKGGFRASMFIFVLSALDNMGFVANMVSIVLYFYMVMHFDLASSANTLTNFMGSTFLLSLVGGFISDTYLNRLTTCLIFGSLEVLALVLLTIQAALPKLHPDACGKSSCVKGGIAVMFYASLYMLALGNGGVKGSMTAFGADQFDEKDPNDAKSLATFFNWLVLSSTLGSVIGVTGVVWVSTQIDWYWGFFIITLASSLGYVILALGKPSYRIKSPGESPILRITQVIVVAFKNRKLTLPESNEELYEISAEDGTVEKVAHTNQMRFLDKATILQENFEPKPWKVCTVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGSIMKLKLGSFTVPSPSIPVIPLIFLCILIPIYEFFFVPLARKITHHPSGITQLQRVGVGLVLSSISMAIAGVIEVKRRDQSRKDSSHPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPSNMKSLSTSFTYLSLSLGYFLSTVFVDVINSVTKRMTPSKKGWLHGSDLNQSNLNLFFWFLAILSCLNFFNFLYWASWYKYKSEDNNAETKTTLKMVDEKKTKKDESIKDIMRGKAKESSQTSEANSEGPSSSDETDEGKEKEGNYR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0461 626 Gene3D MFS general substrate transporter like domains 15 567 IPR036259 -
Lal24g0461 626 Pfam POT family 108 522 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal24g0461 626 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 25 572 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal24g0461 626 MobiDBLite consensus disorder prediction 575 596 - -
Lal24g0461 626 SUPERFAMILY MFS general substrate transporter 21 565 IPR036259 -
Lal24g0461 626 MobiDBLite consensus disorder prediction 612 626 - -
Lal24g0461 626 PANTHER PEPTIDE/NITRATE TRANSPORTER 25 572 - -
Lal24g0461 626 MobiDBLite consensus disorder prediction 575 626 - -
Lal24g0461 626 MobiDBLite consensus disorder prediction 597 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0461 Lal-Chr24 3254476 3257952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0461 22 566 Organic Solute Cotransporters AT1G59740 42.527 4.33e-148 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0461 K14638 - gmx:100812867 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0461 24 3254476 3257952 Lal24g0461 24 3254476 3257952 ECH
Lal13g0581 13 3787399 3790593 Lal24g0461 24 3254476 3257952 LSH
Lal18g0389 18 3309111 3318791 Lal24g0461 24 3254476 3257952 PCT
Lal24g0461 24 3254476 3257952 Lal18g0389 18 3309111 3318791 PCT