Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0581 ATGGAAAATGAAGAACATAAGTCTACTATCCAATGTAAGAAACAAAAGGGTGGATTCCGGGCTTCAATGTTTATCTTTGTGTTGTCAGCATTGGAAAACATGGGATTTGTGGCAAACATGTCGAGCATAGTACTATACTTTTATGGGGTTATGCACTTTGATCTGACTAGTTCAGCAAACACTCTCACAAACCTTTTGGGCTCAACTTTCTTGCTCTCTCTTGTTGGTGGATTCATCTCAGATACTTATTTGAATAGACTAACTACGTGCTTGATTTTTGGATCAATGGAAGTACTGGCTTTGGTATTGCTCACTATTCAAGCTGCTTTACCCCATTTACACCCAAATGCTTGTGGAAAACCAAGCTGTGTCAAAGGTGGCATTGCAGTTATGTTTTATGCATCATTGTTTATGTATGCATTGGGTAATGGAGGAGTGAAAGGGTCTATGACTGCATTTGGTGCTGACCAATTTGATGAGAAGGATCCAAATGGTGCAAAAGCTATTGCTACTTTCTTCAATTGGCTTTTGCTGAGTTCAACTTTGGGGTCAGTAATTGGAGTTACTGGTGTTGTTTGGGTTAGCACACAAAGAGAATGGCATTGGGGATTTTTAATTATAACTGTAGCTTCATCAATTGGTTTTATTACCCTTGCTCTTGGGAAACCATTTTACCGCATCAAAAGTCCTGGTGAAAGCCCCATCTTGAGAATTGTTCAGGTTATTGTTGTGGCATTTAAGAACAGAAAGCTAACATTGCCAGAGTCAAATGAAGAACTTTATGAGATTGGTGATAATGATGCTACAATAGATAAGATATCACACACCAACCAAATAAGGTTTCTAGATAAAGCAACCATTTTTCCAGAAAACTTCGAACCGAAGCCGTGGAAAGTATGCACGGTGACACAAGTTGAAGAAGTGAAGATCCTAACCAGAATGTTACCAATACTTGGCAGTACCATTATAATGAATACTTGTTTAGCACAGCTTCAAACATTTTCAGTCCAGCAAGGGAGTGTAATGAACCTGAAACTTGGTTCTTTTACAGTGTCATCACCATCCATTCCTGTTATCCCTCTTATTTTCTTGTGCATCCTGATTCCCCTATACGAGTTTTTCTTTGTTCCATTTGCAAGAAAGATCACTCACCACCCTTCAGGTATCACACAACTTCAAAGAGTGGGTGTTGGGCTAATACTTTCTTCCATTTCAATGGCAATAGCTGGAGTTATAGAAGTAAAAAGAAGGAACCAAAGCATAAAAGACTCATCACATCCCATAAGTCTATTTTGGCTTTCATTCCAATATGCTATATTTGGGATTGCAGATATGTTCACTCTTGTAGGACTTCTAGAATTCTTCTACAGGGAAGCACCATCAAACATTAAATCATTGTCCACTTCTTTCACATATTTATCCATGTCACTTGGCTACTTTTTGAGCACAGTTTTTGTCAATGTCATAAATAGTGTTACCAAGAGAATCACTCCAAGCAAAAAAGGATGGTTGCAGGGATCTGGCTTAAACCAAAGCAATTTAAACTTGTTCTTTTGGTTCTTAGCAATCCTTAGTTGCCTTAATTTTTTTAACTTCATTTATTGGTCTTCTTGGTACAAGTACAAATCTGAAGATATGAATTCAAGGCCAGATTTGAAGACTATAACTGAAACAAAAACAACTCTGAAAATGGTTGATGATGAGAAAGCCAAGAAGGATGAAAGCATCAAAGATATTATGAGAGGTAAGGCTAAAGAAAGCAGCAGCCAAACAAGTGAAGGCAATAGTGAGGGACCCTCTTTTTCTGATTAA 1812 0.3786 MENEEHKSTIQCKKQKGGFRASMFIFVLSALENMGFVANMSSIVLYFYGVMHFDLTSSANTLTNLLGSTFLLSLVGGFISDTYLNRLTTCLIFGSMEVLALVLLTIQAALPHLHPNACGKPSCVKGGIAVMFYASLFMYALGNGGVKGSMTAFGADQFDEKDPNGAKAIATFFNWLLLSSTLGSVIGVTGVVWVSTQREWHWGFLIITVASSIGFITLALGKPFYRIKSPGESPILRIVQVIVVAFKNRKLTLPESNEELYEIGDNDATIDKISHTNQIRFLDKATIFPENFEPKPWKVCTVTQVEEVKILTRMLPILGSTIIMNTCLAQLQTFSVQQGSVMNLKLGSFTVSSPSIPVIPLIFLCILIPLYEFFFVPFARKITHHPSGITQLQRVGVGLILSSISMAIAGVIEVKRRNQSIKDSSHPISLFWLSFQYAIFGIADMFTLVGLLEFFYREAPSNIKSLSTSFTYLSMSLGYFLSTVFVNVINSVTKRITPSKKGWLQGSGLNQSNLNLFFWFLAILSCLNFFNFIYWSSWYKYKSEDMNSRPDLKTITETKTTLKMVDDEKAKKDESIKDIMRGKAKESSSQTSEGNSEGPSFSD 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0581 603 Gene3D MFS general substrate transporter like domains 1 548 IPR036259 -
Lal13g0581 603 MobiDBLite consensus disorder prediction 585 603 - -
Lal13g0581 603 PANTHER PEPTIDE/NITRATE TRANSPORTER 12 553 - -
Lal13g0581 603 SUPERFAMILY MFS general substrate transporter 130 543 IPR036259 -
Lal13g0581 603 MobiDBLite consensus disorder prediction 573 603 - -
Lal13g0581 603 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 553 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal13g0581 603 Pfam POT family 89 503 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0581 Lal-Chr13 3787399 3790593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g0581 14 548 Organic Solute Cotransporters AT1G59740 42.518 1.96e-146 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0581 K14638 - gmx:100817702 926.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0581 13 3787399 3790593 Lal13g0581 13 3787399 3790593 ECH
Lal13g0581 13 3787399 3790593 Lal24g0461 24 3254476 3257952 LSH
Lal18g0389 18 3309111 3318791 Lal13g0581 13 3787399 3790593 PCT
Lal13g0581 13 3787399 3790593 Lal18g0389 18 3309111 3318791 PCT