Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal18g0389 ATGCAGGCTGAGCAAGAGTTAAAGGAAGAACACAAGCCACTCACTGAATGGAAGAGAAGAAAAGGTGGATTAAGTGCTTCTATGTTCATTTTTGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCATGGTGTTGTACTTTTATGGAGTGATGCACTTTGATTTGTCAAGTTCTGCCAATACTCTCACAAACTTTATGGGCTCAACTTTCTTACTCTCTCTTCTTGGAGGCTTCATCTCAGATACTTACTTAAACAGATTCATCACATGCTTGATTTTTGGATCACTGGAAGTTCTGGCTTTGGCAATGCTCACTGTTGAAGCTGCATCAAATAATCTACATCCAGATGCATGTGGAAAACCAAGTTGTGTAAAAGGTGGTAGTGCAGTAATGTTTTACACCTCACTGTGTTTGTTAGCATTAGGTAATGGAGGAGTGAGAGGGTCTATGACAGCATTTGGTGCTGACCAATTTGATGGAAAAAATCCAAATGAAGCAAAAGCTCTTGCAAGCTTCTTCAATTGGCTTTTACTGAGTTCAACTATAGGAGCAATAAGTGGAGTCACAGGTGTTGTTTGGGTTAGTACTCAAAAAGCTTGGCATTGGGGCTTTTTCATAATGACTATAGCTTCATTTCTTGGCTTTTTTACCCTTGCACTTGGTAAGCCTTTCTACTGCATCAAAACTCCTTCAGATAGCCCCATTTTCAGGATTTTTCAGGTTATTGTTGTGGCTTTTAAAAACCGAAAGGTGTCACTACCTGAGTCACATGAAGAAGTAGAATTATATGAAATGAATGATAAAGATGGTACAATAGAGAAGATTGGTCACACCAACCAGATGAGGTTTTTAGATAAAGCTGCTATTCTTCAAGAAAATACAAAAGTCCAAGCATGGAATGTGTGCACAGTGACACAAGTTGAAGAAGTTAAGATCCTAACTAGAATGTTACCTATAGTAGCCAGTACCATAATAATGAACACATGTTTGGCACAACTTCAAACATTCTCAGTTCAACAAGGAAATGTCATGAACCTTAAACTTGGTTCTCTCATTGTACCAGCACCATCAATTCCTGTTATACCCCTTATTTTCATAAGCATCCTAGTTCCAATCTATGAACTTTTCTTTGTTCCATTAGCAAGAAAAATCACTCACCACCCTTCAGGAATTACACAACTTCAAAGGGTTGGTGTAGGTCTAGTCCTTTCATCAATTTCAATGGTAATAGCTGGGATAGTTGAAGTTAAAAGAAAGGATCAAGGCAGAAAAGACCCTTCTAACCCTATAAGTCTATTTTGGTTGTCCTTCCAATATGGTATATTTGGTATTGCAGATATGTTCACCCTTGTTGGACTATTGGAATTTTTTTATAGAGAATCACCTTCAAGCATGAAATCACTTTCCACTTCTTTCACATGGTTATCTATGTCTCTTGGTTACTTTTTGAGTACTGTCTTTGTTAATGTCATTAATGTTGTTACCAAAAGTATCACTCCTAGTAAACAAGGGTGGTTGCATGGGTTTGACTTGAATCAAAATAATCTGAACTTGTTTTATTGGTTCTTAGCTACACTTAGTTGCCTTAATTTTTTCAACTACCTTTATTGGGCCTCAAGTTACAAGTACAAATCTGAAGAGCATAATAATTCAAGCCCAAATTTGATGGCTTTGAATGGTGGAAATGCCTAA 1698 0.3746 MQAEQELKEEHKPLTEWKRRKGGLSASMFIFALDNMGFVANMVSMVLYFYGVMHFDLSSSANTLTNFMGSTFLLSLLGGFISDTYLNRFITCLIFGSLEVLALAMLTVEAASNNLHPDACGKPSCVKGGSAVMFYTSLCLLALGNGGVRGSMTAFGADQFDGKNPNEAKALASFFNWLLLSSTIGAISGVTGVVWVSTQKAWHWGFFIMTIASFLGFFTLALGKPFYCIKTPSDSPIFRIFQVIVVAFKNRKVSLPESHEEVELYEMNDKDGTIEKIGHTNQMRFLDKAAILQENTKVQAWNVCTVTQVEEVKILTRMLPIVASTIIMNTCLAQLQTFSVQQGNVMNLKLGSLIVPAPSIPVIPLIFISILVPIYELFFVPLARKITHHPSGITQLQRVGVGLVLSSISMVIAGIVEVKRKDQGRKDPSNPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPSSMKSLSTSFTWLSMSLGYFLSTVFVNVINVVTKSITPSKQGWLHGFDLNQNNLNLFYWFLATLSCLNFFNYLYWASSYKYKSEEHNNSSPNLMALNGGNA 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal18g0389 565 Pfam POT family 91 507 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal18g0389 565 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 554 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lal18g0389 565 SUPERFAMILY MFS general substrate transporter 10 224 IPR036259 -
Lal18g0389 565 Gene3D MFS general substrate transporter like domains 2 553 IPR036259 -
Lal18g0389 565 PANTHER PEPTIDE/NITRATE TRANSPORTER 11 554 - -
Lal18g0389 565 SUPERFAMILY MFS general substrate transporter 129 549 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal18g0389 Lal-Chr18 3309111 3318791 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal18g0389 1 547 Organic Solute Cotransporters AT1G69850 41.468 3.99e-144 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal18g0389 K14638 - aprc:113861407 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g0389 18 3309111 3318791 Lal18g0389 18 3309111 3318791 ECH
Lal18g0389 18 3309111 3318791 Lal13g0581 13 3787399 3790593 PCT
Lal18g0389 18 3309111 3318791 Lal24g0461 24 3254476 3257952 PCT
Lal13g0581 13 3787399 3790593 Lal18g0389 18 3309111 3318791 PCT
Lal24g0461 24 3254476 3257952 Lal18g0389 18 3309111 3318791 PCT