Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0298 ATGAGGATGTCCAAAAGAAACTATGCTCGAATTGACCTCGTGGAACTGAAAGCTCTGATTGCTCATAAGGTTGGTAATCAGAGAGCTGAAAAGTACTTTGAACAGCTTGTAAAATTGTTCAGTTCAAAGATCAGCAAGTCCGAGTTCGACAAGGTTTGCATCATGACAATTGGGAAGGAAAATATCTCGCTTCACAACCAACTCATCAAGGGGATTCTCATGAACACTTGTCTGGCTAAAACCCCACCTCAGAGAGGTTCTGCAAAAACAGGGTCAACTATCAGTGGAAAAGTTTCGAATGGGGATGCATTACCTCCTTCCCCACGGAGGCATGGATCTTTGGCTGTTCAAAACTGCAAGCTTAATAAGGGCCGCCAAATTGCTAGAGGGGCATTGGGCAAACCACATAGTCTTGCATCTGAAGAATTGATCTCCAAGACACTACAGCAACAGAGTGCAACGGAACTGAATTCCCTTGGCAGCAGACCTCCGGTCTCCGTTGAAGATGGAGAAGAAGTTGAGCAGATGGCTGGAAGCCCTACCATCCAGAGTAGGAGCCCGGTTACAGCTCCTCTTGGTATATCCATGAACTTTGGTGGCAGCCGTAAGCTCATTTCTAATGTGTCATTGTGCAGTAAATATTATCCAGAAACCTGTCACAGCCGCGGAGATCTCCCTGACTCAAGATCTTTGAGGAGTCGTTTGGAGCAGACTGTGGAGAAGGAGAGTTTAACTGTGTCAGTGGATTGTGTAAATCTATTGAATAATGCATTGGATTCATATTTGAAGAGTTTGATTGAATCCTCTCTGACTTTAGCTAGGTCAAGATTTGGAAATGAGGAGCTAAGACTACCAAATGGACGATTGGCGACTGGTTCAAACAGATTGTTTCCTGGAAGATATATGCAAACAGCAACACAATCTGCTGTTACATCTGTCTTAGATTTTCGTGTTGCAATGGAATTGAATCCTCAAGTTCTTGGACCAGATTGGCCCATACAACTTGAGAAGATTTGCACGCTTGCTTCTGAAAAATGA 1038 0.4393 MRMSKRNYARIDLVELKALIAHKVGNQRAEKYFEQLVKLFSSKISKSEFDKVCIMTIGKENISLHNQLIKGILMNTCLAKTPPQRGSAKTGSTISGKVSNGDALPPSPRRHGSLAVQNCKLNKGRQIARGALGKPHSLASEELISKTLQQQSATELNSLGSRPPVSVEDGEEVEQMAGSPTIQSRSPVTAPLGISMNFGGSRKLISNVSLCSKYYPETCHSRGDLPDSRSLRSRLEQTVEKESLTVSVDCVNLLNNALDSYLKSLIESSLTLARSRFGNEELRLPNGRLATGSNRLFPGRYMQTATQSAVTSVLDFRVAMELNPQVLGPDWPIQLEKICTLASEK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0298 345 MobiDBLite consensus disorder prediction 82 100 - -
Lal24g0298 345 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 8 272 IPR024738 GO:0070461
Lal24g0298 345 MobiDBLite consensus disorder prediction 82 113 - -
Lal24g0298 345 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 344 - -
Lal24g0298 345 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 344 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0298 Lal-Chr24 2141470 2142507 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0298 - - gmx:100817344 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0298 24 2141470 2142507 Lal24g0298 24 2141470 2142507 ECH
Lal12g0389 12 2759761 2760801 Lal24g0298 24 2141470 2142507 ECH
Lal12g0389 12 2759761 2760801 Lal24g0298 24 2141470 2142507 LSH
Lal13g0380 13 2395345 2396370 Lal24g0298 24 2141470 2142507 LSH