Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g0380 ATGAGGATGTCCAAAAGAAACTTTGCTCGAATTGATCTTGCGGAGCTGAAAGCTCTGATTGTTCGGAAGGTTGGTTATCAGAAAGCTGAAAAGTACTTTAACCAGCTTGTAAAATTGTTCAGTTCAAAGATTAACAAGACTGAGTTTGACAAGATTTGCATCATGACAATCGGGAAGGAAAATATCCAGCTTCACAACCAACTCATCAAGGGAATTCTCATGAATACTTGTCTGGCTAAAACTCCACCTCAGAGAGGTTCTTCGAAAACAGGGTCCATCCTTCGTGAAAAAGTTTCAAATGGGGATGTGTTACCTCCTTCCCCACGGAGGCGTGGCTCTTTGCCTGTTCGAGACCATAAGTTTAATACGGGCCGCCAAAATGCTGCAGGGCCATTGGGCAAGCCACAAAGCCTTGCATCTGAAGAATTGATCTCTAAGACACTAGTGCAGCAGAGTGCAACGGAACTGAATTCCCTTGGCAGCAGACCTCCTGTTTCCGTTGAAGATGGAGAAGAGGTTGAACAGATGGCTGGAAGCCCTAGCATCCAGAGTAGGAGCCCAGTTAGAGCTCCTCTTGGTATATCCATGAATTTTGGCGGCGGCCGTAAGCTTCTTTCTAATGTGTCACTGTGCAATAAATATTATGAAGAAACCTGTCACAGCTGTGGGCATCTCCCTGATTCAAGATCTTTGAAGAGTCGTTTGGAGCAGAAGTTGGAAAAGGAGGGTTTAACTGTTTCTGTGGATTGTGTAAATGTATTGAATAATGCACTGGATTCATATCTGAAGAGGTTGATTGAGTCCTATATTAGTTTAGATAGGTCAAGAAATAAGGAGCTTATACATGGACGATTGAGGACTGGTTCAAACAGATTGTGTCCTGGAAGATATATGCATACACCAACACAATCTGCTGGTACGTCTCTCTTAGACTTTCGTGTTGCAATGGAATTAAATCCACAAGTTCTTGGACCAGATTGGCCTATACAGTTTGAGAAGATTTGCATGCTTGCTTCTGAAGAATGA 1026 0.4308 MRMSKRNFARIDLAELKALIVRKVGYQKAEKYFNQLVKLFSSKINKTEFDKICIMTIGKENIQLHNQLIKGILMNTCLAKTPPQRGSSKTGSILREKVSNGDVLPPSPRRRGSLPVRDHKFNTGRQNAAGPLGKPQSLASEELISKTLVQQSATELNSLGSRPPVSVEDGEEVEQMAGSPSIQSRSPVRAPLGISMNFGGGRKLLSNVSLCNKYYEETCHSCGHLPDSRSLKSRLEQKLEKEGLTVSVDCVNVLNNALDSYLKRLIESYISLDRSRNKELIHGRLRTGSNRLCPGRYMHTPTQSAGTSLLDFRVAMELNPQVLGPDWPIQFEKICMLASEE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g0380 341 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 341 - -
Lal13g0380 341 MobiDBLite consensus disorder prediction 81 136 - -
Lal13g0380 341 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 9 272 IPR024738 GO:0070461
Lal13g0380 341 MobiDBLite consensus disorder prediction 81 95 - -
Lal13g0380 341 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 341 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g0380 Lal-Chr13 2395345 2396370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g0380 - - gmx:100817344 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0380 13 2395345 2396370 Lal13g0380 13 2395345 2396370 ECH
Lal12g0389 12 2759761 2760801 Lal13g0380 13 2395345 2396370 LSH
Lal13g0380 13 2395345 2396370 Lal24g0298 24 2141470 2142507 LSH