Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0389 ATGAGGATGTCCAAAAGAAGCTATGCTCGAATTGATCTCGTGGAGATAAAAGCTTTGATTATTCGGAAGGTTGGTCATCAGAGAGCTGGAAAGTACTTTGATCACCTTCAAAGATTGTTCAGTTCAAAGATTAGCAAGGTTGAGTTTGACAAGATTTGTATCATGACAATTGGGAAGGAAAATATCCCCTTTCACAACCAACTCATTAGGGGAATTCTCATGAATATTTGTCTGGCTAAAACCCCACCTCAGAGAATTTCTGCAAGAACAGGGTCTACTACCCTCAGTGAAAAGGTTTCAAATGGGGATGCTTCGCCTACTTCCCCACGGAGGCGTGGCTCTTTGGCTGCTCGAAACGTCGAGTTTAATAAGGGCTGTCAAAATGATCCAGGGCTACTGGGTAAGCTGCAAAGACTTGCTTCTGAAAAGTTGTTCTCCAAGACACCAGAGTGGCAGAGTGCAACGGAACTGAATTCCCTTGGCAGCAGACCCCCTGTCTCAGTTGAAGATGGAGAAGAGGTTGAACAGATTGCTGGAAGCCCTAGCTTCCAGAGCTGGAGCCCGGTTACAGCTCCTCTTGGTATATCCATGAATTATAGTGGTGGTGGTAAGCTCCGTTCTAACGTGTCATTGTGCAGTAAATATTATCCAGAAACCTGTCACAGCCGCGGAGATCTCCCTGACTCAAGATCTTTGAGGAGCCGTTTGGAGCAGAAGTTGGAGGGGGAGGGTTTAACTGTGACAGTGGATTGTGTGAATCTATTGAATAATGCGCTGGATTCATATCTGAAGAGGGTGATCGAGTCCTCTATGGGTTTAGCTGGGTCAAGATTTAGAAACGAGGAACTAAGACAACCAAATGGACGGCCGATGACTGATTTGAGGGCATTGCTTCCTGGAAGGTATATGCAAACAGCAACACAATCTGCTGGAATATCTGTCTTAGATTTTCGTGTTGCGATGGAACTAAATCCACAAGTTCTTGGACCAGATTGGCCCATACACCTTGAAAAGATTTGCATGCATGCTTTGGAAGAATGA 1041 0.4515 MRMSKRSYARIDLVEIKALIIRKVGHQRAGKYFDHLQRLFSSKISKVEFDKICIMTIGKENIPFHNQLIRGILMNICLAKTPPQRISARTGSTTLSEKVSNGDASPTSPRRRGSLAARNVEFNKGCQNDPGLLGKLQRLASEKLFSKTPEWQSATELNSLGSRPPVSVEDGEEVEQIAGSPSFQSWSPVTAPLGISMNYSGGGKLRSNVSLCSKYYPETCHSRGDLPDSRSLRSRLEQKLEGEGLTVTVDCVNLLNNALDSYLKRVIESSMGLAGSRFRNEELRQPNGRPMTDLRALLPGRYMQTATQSAGISVLDFRVAMELNPQVLGPDWPIHLEKICMHALEE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0389 346 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 346 IPR024738 GO:0070461
Lal12g0389 346 MobiDBLite consensus disorder prediction 87 108 - -
Lal12g0389 346 MobiDBLite consensus disorder prediction 87 113 - -
Lal12g0389 346 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 346 - -
Lal12g0389 346 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 273 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0389 Lal-Chr12 2759761 2760801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0389 - - gmx:100817344 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0389 12 2759761 2760801 Lal12g0389 12 2759761 2760801 ECH
Lal12g0389 12 2759761 2760801 Lal24g0298 24 2141470 2142507 ECH
Lal12g0389 12 2759761 2760801 Lal13g0380 13 2395345 2396370 LSH
Lal12g0389 12 2759761 2760801 Lal24g0298 24 2141470 2142507 LSH