Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0294 ATGAAGTTTATGAAACTTGGTTCTAAGCCGGATACCTTCCAGACTGATGGGAACAATGTTAGGTATGTGGCAAGTGAGTTGACATCAGATATCATTGTTAGCCTAGGGGATGTAAAGTTTTATTTACATAAGTTCCCTCTTTTATCAAAGAGTGCTCACTTGCAGAAGTTGATATCCCTCAGTAATGAAGGAAACATGGATGAAGTTCAAATTTCTGACATTCCTGGTGGCACAAGTGCCTTTGAGATATGTGCTAAGTTTTGCTATGGCATGACAGTTACCCTCAATGCCTACAATGTGATTGCTGCTCGATGTGCAGCTGAGTACCTTGGAATGCATGAGACCATTGAGAAAGGGAACCTCATTTACAAGATTGATGTTTTCCTCAGTTCTAGCATTTTCTGTAGTTGGAAGGACTCAATTATCCTTCTTCAGACTTCCAAGTCTATGTCACCCGTGGCTGAAGACTTAAAGGTGGTAAGTCATTGCATTGAATCTATAGCAAATAAGACATGTGTTAATGTATCCAAAGTTGACTGGTCCTATACCTATAACCGGAAAAAGCTTCCAGAGGAAAATGGGATTGGTGCAAACCAGAATGAAGTCAGAACTCGATTGGTGCCGAAAGACTGGTGGGTTGAAGATTTATGTGAGCTTGAAGTTGATTTGTACAAGTCTGTAGTTGCAAATATTAAAACCAAGGAAGTTCATTCTAATGAAGTAATTGGGGAAGCCTTGAAAGCTTATGCTTACAGAAGATTGCCAAATTTCAGCAAGAGTGTGATCCAGAGCGGGGGCATGTCAAAGCATCGTTTGATCGTTGAAACTATCGTGTGGTTGTTGCCTGCTGAGAAAGGCAGTGTTTCTTGTAGGTTCTTACTAAAGTTGTTGAAAGCTTCCATTTTTGTAGAGTCGGGAGAAAGGACCAGAGAAGAGCTGATAAGGAGAATTGGGCAGCAACTGGAGGAGGCTTCTGTAACTGATATTTTGATTCCAGCACCAGATGGAAAGACTGAAACCTATGATGTTAGTATAGTACTAAAAATGGTAAGAGAATTTCTTAAGAAAGATGTCAATGCTGAGATTGAATTGGTTGGCGGTGGTGAACTCGAGGGGATAAGAAAGCCAGGGATTTTATCAGATGCTTCCAAGCTGATGGTTGCAAAACTCGTAGATGGGTACCTTGCTGAAATTGCAAAGGATCATAATTTACCTTTGTCAGATTTTATTGATCTTGCTGAGTTAGTATCTGGAATTTCTCGTCCTTCTCATGATGGGATTTACAGGGCTATTGACACATATCTCAAGGAGCACCCTGGTATCAGCAAAGGAGAGAGGAAGAGGATATGCAAGCTGATGGATTGCAGAAAGCTATCAGTTGATGCATGCTTGCATGCGGTGCAAAATGAAAGGCTGCCATTGCGGGTAGTTGTGCAGGTACTCTATTTTGAGCAAGTAAGGACTGCTGCTTCATCGGGTACTAGCACGCCCGACATACCTAAAGGAATCAAGGATTTGAACTGTGGATCCAATGGTAGTTCAAGGTCAGGGACAACTAACCCAGAAGATGACATGGATGTTGTGGCCAAAGCGGAGGAGCTGAAGGCATTAAGAAAGGAACTTGCATCATTGAGGCTGAGCAATGGAGTTGGTAATATTGACAAAGATGGCGGAGATATTAAACCAAGCGCGGACAAGGCTGTTATTGGCAAGATGAAAGGTTTGCTCAAGTCAAAGAAGTCTTTCCTGAAGCTCTGGGCCAGCAAAGGGGTGCAAGGGGAAAATAGTGGCTCAGACTCATCAGAGAGCATTGGTTCTGCTAACCCTGATGAATCTAAATCTACTCCATCTAGAAATAGGAGGCATTCAGTTTCTTGA 1878 0.4223 MKFMKLGSKPDTFQTDGNNVRYVASELTSDIIVSLGDVKFYLHKFPLLSKSAHLQKLISLSNEGNMDEVQISDIPGGTSAFEICAKFCYGMTVTLNAYNVIAARCAAEYLGMHETIEKGNLIYKIDVFLSSSIFCSWKDSIILLQTSKSMSPVAEDLKVVSHCIESIANKTCVNVSKVDWSYTYNRKKLPEENGIGANQNEVRTRLVPKDWWVEDLCELEVDLYKSVVANIKTKEVHSNEVIGEALKAYAYRRLPNFSKSVIQSGGMSKHRLIVETIVWLLPAEKGSVSCRFLLKLLKASIFVESGERTREELIRRIGQQLEEASVTDILIPAPDGKTETYDVSIVLKMVREFLKKDVNAEIELVGGGELEGIRKPGILSDASKLMVAKLVDGYLAEIAKDHNLPLSDFIDLAELVSGISRPSHDGIYRAIDTYLKEHPGISKGERKRICKLMDCRKLSVDACLHAVQNERLPLRVVVQVLYFEQVRTAASSGTSTPDIPKGIKDLNCGSNGSSRSGTTNPEDDMDVVAKAEELKALRKELASLRLSNGVGNIDKDGGDIKPSADKAVIGKMKGLLKSKKSFLKLWASKGVQGENSGSDSSESIGSANPDESKSTPSRNRRHSVS 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0294 625 Gene3D Potassium Channel Kv1.1; Chain A 8 121 IPR011333 -
Lal24g0294 625 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Lal24g0294 625 MobiDBLite consensus disorder prediction 507 521 - -
Lal24g0294 625 PANTHER OS12G0117600 PROTEIN 1 622 IPR043454 -
Lal24g0294 625 MobiDBLite consensus disorder prediction 590 625 - -
Lal24g0294 625 Pfam NPH3 family 210 463 IPR027356 -
Lal24g0294 625 MobiDBLite consensus disorder prediction 591 613 - -
Lal24g0294 625 ProSiteProfiles NPH3 domain profile. 210 487 IPR027356 -
Lal24g0294 625 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY2 1 622 IPR029960 GO:0009958
Lal24g0294 625 Pfam BTB/POZ domain 25 118 IPR000210 GO:0005515
Lal24g0294 625 MobiDBLite consensus disorder prediction 491 524 - -
Lal24g0294 625 Coils Coil 527 547 - -
Lal24g0294 625 SUPERFAMILY POZ domain 21 117 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0294 Lal-Chr24 2115954 2122070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0294 8 493 EF-hand Containing Proteins AT3G44820 34.357 5.44e-91 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0294 - - gmx:100818944 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0294 24 2115954 2122070 Lal24g0294 24 2115954 2122070 ECH
Lal12g0386 12 2738303 2743118 Lal24g0294 24 2115954 2122070 ECH
Lal12g0386 12 2738303 2743118 Lal24g0294 24 2115954 2122070 LSH
Lal13g0377 13 2377574 2382490 Lal24g0294 24 2115954 2122070 LSH