Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0178 ATGTCGGGGCTTGTGGTGGTGACAAAGGGTGGTGGTTGCGGTCGTAGGAAGAGGTCGAGATCGGTTAGAACCGCCGAAGAAGAAGAACAACAAAGCCAGCTGTCACTAGTTGCGTTGCTGTTAGCGGCGCTGAGAAAATCTATGGTGTCGTGCAAAGTTGACAGACCTGACGATGTAATCTCGACCGTTCATCAGATGGAAATCGGATGGCCAACAAATGTTCAGCACATAACTCATGTTACCTTTGATCGCTTCAATGGCTTTCTGGGTCTCCCAGTTGAGTTTGAAGTTGAGATCCCGGGTCGGGTTCCCAGTGCTAGTGTAAGTGTATTTGGCGTCTCAGCTGAATCCATGCAGTGTTCTTATGACTCAAAAGGAAACAGTGTCCCAACTATTCTCTTGCTAATGCAGGACCGTTTATACTCTCAGGGTGGCTTAAAGGCTGAAGGTATATTTCGCATAAACCCGGAAAATAGTCAAGAGGAGCATGTGAGGGACCAATTGAATAGGGGCATTGTGCCAGATGACATTGAAGTCCACTGTTTGGCAGGTCTAATTAAAGCCTGGTTCCGAGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCCCCTGAGCGAGTTCTTCAGTGCAACACGGAAGAAGATTCTGTAGACCTTGTGAAGCAACTAAAGCCAACTGAGTATGCCTTGCTCAGCTGGGCTATTGATCTCATGGCTGACGTTGTAGAAGAAGAGGAGTATAACAAAATGAATGCAAGAAACATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCACTAACCGCACTGATGCATGCGGTTCAAGTGATGAACTTACTGAAGACACTGATAATGAAGACACTTAGAGAACGTGAAGAAACTGCCACAACAGGAGGGTATTCACCTATGTCATTTCATTCATCAGATCGCCAATCTGAGGATGAATATGACAGTCAGCAAGAAATGGACACCAGCGATGAATTGAGAGATGAGAACAAGTCAGGTTATGATGATAATGTTCATTGCAGTGATAGCAGCGAAGAGGAAACTGAGGCTGAACCTTTAAGTGAAATAGAGGAATGCTTCTTGGAGCATTTGGATGAGAATATACAAGAGTTCTCAGAACCTGCAGGTTATTTGCAAGAGTTTGCGAGCCCCGGAAGTTACTCTGCCCATAGCATGGAATCTATATACATCACTGATAGCAAAACCGTAAATTCTTGTTTGAGTTCCGCAGATGGAGGAAACTTGAGGACAACACTGACTTCAGTGAACTCAAATGTTGACACAAGTTGTCCACCAGTAGGATGTACAAGCACAAATGGTGTGGAGATGATAGGCAAAATTACGGATTCGGTTTCACCAATGCCGCGGCTTGCATCTAGTTAA 1395 0.4502 MSGLVVVTKGGGCGRRKRSRSVRTAEEEEQQSQLSLVALLLAALRKSMVSCKVDRPDDVISTVHQMEIGWPTNVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIEVHCLAGLIKAWFRELPSGVLDGLSPERVLQCNTEEDSVDLVKQLKPTEYALLSWAIDLMADVVEEEEYNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETATTGGYSPMSFHSSDRQSEDEYDSQQEMDTSDELRDENKSGYDDNVHCSDSSEEETEAEPLSEIEECFLEHLDENIQEFSEPAGYLQEFASPGSYSAHSMESIYITDSKTVNSCLSSADGGNLRTTLTSVNSNVDTSCPPVGCTSTNGVEMIGKITDSVSPMPRLASS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0178 464 PANTHER MKIAA1688 PROTEIN 1 455 IPR044785 GO:0005096
Lal24g0178 464 ProSiteProfiles CRIB domain profile. 68 81 IPR000095 -
Lal24g0178 464 SMART RhoGAP_3 127 290 IPR000198 GO:0007165
Lal24g0178 464 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 455 - -
Lal24g0178 464 ProSiteProfiles Rho GTPase-activating proteins domain profile. 113 294 IPR000198 GO:0007165
Lal24g0178 464 MobiDBLite consensus disorder prediction 310 350 - -
Lal24g0178 464 Gene3D Rho GTPase activation protein 100 294 IPR008936 GO:0007165
Lal24g0178 464 Gene3D CRIB domain 63 99 IPR036936 -
Lal24g0178 464 SUPERFAMILY GTPase activation domain, GAP 109 287 IPR008936 GO:0007165
Lal24g0178 464 MobiDBLite consensus disorder prediction 295 357 - -
Lal24g0178 464 SMART PBD_5 68 102 IPR000095 -
Lal24g0178 464 Pfam RhoGAP domain 130 264 IPR000198 GO:0007165
Lal24g0178 464 CDD RhoGAP 130 286 - -
Lal24g0178 464 Pfam P21-Rho-binding domain 67 96 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0178 Lal-Chr24 1308861 1312276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0178 - - gmx:100807134 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0178 24 1308861 1312276 Lal24g0178 24 1308861 1312276 ECH
Lal5g0307 5 2707093 2711162 Lal24g0178 24 1308861 1312276 PCT
Lal18g0443 18 3678449 3681438 Lal24g0178 24 1308861 1312276 PCT
Lal24g0178 24 1308861 1312276 Lal5g0307 5 2707093 2711162 PCT
Lal24g0178 24 1308861 1312276 Lal18g0443 18 3678449 3681438 PCT