Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0161 ATGGAATCAAGTAATGTAATATGCATTCCCAATGGAGAAAACAATATTATTGATCACAGGGAGGATAATAATAAAAGTTTCAAAATTTCAGTTCCATCCATTATTTCCTGTCTTGGAGAGAAAAAGATCCACAGTGTCACTTCCTATTTCAGTGATAATAAAATGAAAAATGAGCTTCAAACTAAACAAATAATACATAGTATCAAAGTTGGAATCTCTCTTGTTTTGGTGTCACTTCTATACTTGGTGGATCCTCTATACGAACAAGTTGGAGAAAATGCAATGTGGGCTATCATGACTGTGGTTGTCATCTTTGAATTCTCTGCAGGAGCTACACTAGGCAAGGGTTTAAACCGTGGGATGGGAACTATATTAGGAGGTGGACTTGGTTGCATAGCAGCAGTTTTGGCCCAAAATCTTGGTGTAGTTGGAAACAAAGTTATCATTGGTGCTTCTGTATTTATGTTTGGGATGATTGGGACATATTTTCGAATGGTTCCAAGGATAAAGAAAAGATATGATTATGGAGTGATGCTTTTCATCTTGACTTATAATCTGGTGGTGGTATCTGGTGTGAGGGCTGATCAGAAAGTGTGGGATATTGCATGTGAACGTTTTTTAACAATCCTAATGGGCTTCATCATATGTATTTGTGTGAGCTTGTTATTTTTTCCATTGTGGGCCAGTGATGAACTTCATCAATCTACTGTCACAAGATTCCAAGAACTTGCCAATACAATTCAAGGTTGTTTGGAGGAATATATAAATATCGCTATTAAAGAGGAAACTAAGTCTAGTGTTAGCTTCGGTGTTTGCAAGTCGATGTTGAACTCCAAGTCCAAGGATGAGTTACTGGCAAATTATGCAAAATGGGAACCTTGGCATGGAAAATTTGGATTTTATTACCCTTGGGAGAAGTACCTAAAGATTGGAGAGGCTCTTCGAGAAATGGCTGCAATTGTTCTTGCTCTTGGAGGTTCCATCCAAACCTCAAGATCGCCCAAGGAATTTACATCTGTGAATCAAACAGTCCAATTGAAACTATGCGAAGCAATTGGTTCAGATATTGTGTGGACTCTGCGAGAACTTGGAGACAGCATGAAACAAATGAGGAAATGTGAAGCAGACACTCATATATCAGAAAAGTTAAAGGCAGCAAGAACAGAACTAAGCTTGGTGATATCCATGTCCAACATATCAGTGCTTGAGAACATTGATGCACTAGCAATTGCCAGCTTCATATTCTTACTAAAAGAGGTGGTGGACAAGGTAGAGGAATTGACCAAAGAGGTGGACCAAGTTGGAGACATAGCTGGTTTTCGCTCTTACTAG 1332 0.3866 MESSNVICIPNGENNIIDHREDNNKSFKISVPSIISCLGEKKIHSVTSYFSDNKMKNELQTKQIIHSIKVGISLVLVSLLYLVDPLYEQVGENAMWAIMTVVVIFEFSAGATLGKGLNRGMGTILGGGLGCIAAVLAQNLGVVGNKVIIGASVFMFGMIGTYFRMVPRIKKRYDYGVMLFILTYNLVVVSGVRADQKVWDIACERFLTILMGFIICICVSLLFFPLWASDELHQSTVTRFQELANTIQGCLEEYINIAIKEETKSSVSFGVCKSMLNSKSKDELLANYAKWEPWHGKFGFYYPWEKYLKIGEALREMAAIVLALGGSIQTSRSPKEFTSVNQTVQLKLCEAIGSDIVWTLRELGDSMKQMRKCEADTHISEKLKAARTELSLVISMSNISVLENIDALAIASFIFLLKEVVDKVEELTKEVDQVGDIAGFRSY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0161 443 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 3 441 - -
Lal24g0161 443 Pfam Aluminium activated malate transporter 61 398 IPR020966 GO:0015743
Lal24g0161 443 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0161 Lal-Chr24 1176167 1180143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0161 62 394 Miscellaneous Gene Families AT5G46600 43.695 2.11e-90 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0161 - - gmx:100527892 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0161 24 1176167 1180143 Lal24g0161 24 1176167 1180143 ECH
Lal1g1932 1 21475336 21477170 Lal24g0161 24 1176167 1180143 PCT
Lal11g1279 11 16427019 16430166 Lal24g0161 24 1176167 1180143 PCT
Lal24g0161 24 1176167 1180143 Lal11g1279 11 16427019 16430166 PCT