Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal11g1279 ATGGATATTGAGTCAACAACTCAAGTTAACAAGGTTGGATGTTTTGCTCAATTAGGGAAATTCCTCATGGCTTTGCCTAGGAAATCCAAGTCTAAGGTTATCAACTTTGCAAGGAGCTTAAAGAAGATTGGACAAGATGACCCCAGAAGAGTAATTCATTCATTAAAAGTAGGAATTGCTCTCACATTTGTGTCTTTGTTTTACTACTCTAGGCCACTTTATGATGGCTTTGGAGTTGCTGGAATGTGGGCTGTTCTTACAGTGGTGGTAGTATTTGAATTCACCGTAGGTGGAACCCTCGGCAAATGTTTAAATAGAGGATGTGCTACACTATTAGCTGGTGCTTTAGGTGTTGGAGCTAAACACTTAGCTACTGCTTTAGGTAAAAGAGGAGAACCTATTATCCTTGGGGGCCTTGTCTTCATTCTAGCTGCAGGGGCTACATTTTTCAGATTTTGTCCGAAGATCAAGCAAAGATATGACTATGGGATAACAATATTTATATTGACATTCAGTTTGGTTACAGTATCAGGGTATAGGGTAGAGCAACTTTTTGAGCTTGCCCATCAGAGACTTTCAACAGTTTTAATAGGAGCTACAGCATGCATGGTCATCTCCATTTTCATTTGTCCAGTGTGGGCTGGTCAAGACCTTCACAAGTTGGTTTCTTCCAATATAGACAAGCTAGCAAATTATCTAGAAGGATTTGAAGACGAATATTTTCAATGCATGGAGGATAAAGAAAAAACTAAGAAGTCAGTTATAGAAGAAGGATATAAAAGTGTTCTCAATACCAAAGCAAACGAAGAGTCCTTGGCAAATTTGGCAAGATGGGAACCAGGACATGGTGGTTTTCGTCTTTCTCATCCTTGGAAGCAATACTTGGAAATTGGTGCACTTACTAGACAATGTGCTTACATGCTTGAAACTCTCAACAACTACCTTTACCCTGAAATCCAAGCATCCTTGGAATTCAAGTGTAAAATTCAAGAACCATGCACAAAGATGAGTGCAGAATCAAGTAAGGCCTTGAAAGCAATTTCATCATCAATGAAAACAATGACAGACCCATCAGCTGCTAAGTGCCACATAGAAAATTCTAAAGCTGCAACTAAAGACCTAAAAATTGCACTTGAAACAATTTCATTGGAAGATGTAGAAGTCTTAGCAATAATCTCAGTTGCTACAGTTGCAGCAATACTTGAAGAAATCACAAAGTCAGTGGAGAAAATTTATGAATCTGTCTCTGAGCTTTCTCATTTGGCTCATTTCAAGAGTGTAGAATCCAATGTCTCAATAGAGAAACCACCCCTTGGTCCATTGCTTCACCGAGGAATCATAAATCCTGTTGTGGACATTTATAACAATGACCATGTTGAAATTATGATCCAAGAGATCATAACTACAGATTCACCAGAAAAACTAAATGCACCAGAAAAATTAATCCCAACGTGTAAAGCTTCTATCAGTTGTAATTAA 1479 0.3827 MDIESTTQVNKVGCFAQLGKFLMALPRKSKSKVINFARSLKKIGQDDPRRVIHSLKVGIALTFVSLFYYSRPLYDGFGVAGMWAVLTVVVVFEFTVGGTLGKCLNRGCATLLAGALGVGAKHLATALGKRGEPIILGGLVFILAAGATFFRFCPKIKQRYDYGITIFILTFSLVTVSGYRVEQLFELAHQRLSTVLIGATACMVISIFICPVWAGQDLHKLVSSNIDKLANYLEGFEDEYFQCMEDKEKTKKSVIEEGYKSVLNTKANEESLANLARWEPGHGGFRLSHPWKQYLEIGALTRQCAYMLETLNNYLYPEIQASLEFKCKIQEPCTKMSAESSKALKAISSSMKTMTDPSAAKCHIENSKAATKDLKIALETISLEDVEVLAIISVATVAAILEEITKSVEKIYESVSELSHLAHFKSVESNVSIEKPPLGPLLHRGIINPVVDIYNNDHVEIMIQEIITTDSPEKLNAPEKLIPTCKASISCN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal11g1279 492 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 8 1 435 - -
Lal11g1279 492 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 435 - -
Lal11g1279 492 Pfam Aluminium activated malate transporter 42 419 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal11g1279 Lal-Chr11 16427019 16430166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal11g1279 1 452 Miscellaneous Gene Families AT3G11680 58.206 2.00e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal11g1279 - - lang:109334066 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal11g1279 11 16427019 16430166 Lal11g1279 11 16427019 16430166 ECH
Lal11g1279 11 16427019 16430166 Lal24g0161 24 1176167 1180143 PCT
Lal24g0161 24 1176167 1180143 Lal11g1279 11 16427019 16430166 PCT