Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal1g1932 ATGGAATCATCTCACATAATATCCATTGTGAAAGTTCAAATGAAAAAGGAGAATAATAATAAAATACTCCCCAGGGACAAGCACAATGAGACAAGGAACATAATCCACAGTATCAAAGTAGGTGTCTCCTTGGTTTTGGTTTCACTTATGTACCTCTTGAATCCTCTCTTTCATCAGGTTGGAGAAAATGCTATGTGGGCTGTCATGACTGTTATTGTCATTTTTGAATTCTCAGCAGGAGCCACATTGGGAAAGGGATTCAATCGTGGGATGGGAACTATAGTAGGAGGTGGACTAGGTTGGTTAGCAGCAATTTTTGCACAGAGCATTGGAGGAGTTGGTAACTCAATTATCATTGGAACAGTTGGTACATATATTCGATTGATACCGAGGGTAAAAGAAAGATATGAATATGGGGTGGTGACATTGATGCTGACATTCAACCTGGTAGTGATGTATGGTCTACGTGCTAATGAGAAAGTGTGGGAAATAACACGTCAACGTCTCTTATCAATTCTTATGGGTTTCATTGTATGCATTTGTGTCAGCTTATTCATCTTTCCCTTATGGGCCAGCGATGAACTTCATCATTCCACTGTCTCTACATTCCATGATCTTGCTAATACAATTCAGGGTTGTTTGGAGGAAAATGGCACACTCGTTAGTGAAAATGAAAGTCAACTCATTGCAGGCTTCAATTTTTGCAACTCGGTTTTGAACTCCAAGTCAGAGGATGAGTTATTGGCAAATTCCGCAAGATGGGAACCATGGCATGGAAAATTTGGATTTTGCTACCCTTGGGAGAACTACTTAAAAATTGCAAGTGTTCTTCGAGAACTGGCTACATTTATTCTTGTTGTTGGACATTCCCTACAATCTTCAAAACAGGATATGGCATGTTTGAGGCAGTCACATTCAGAGCAATTGGAAACATGTGAAGCAATTGGGTCAAGGGTAGCATGGGCTTTGAGAGAACTAGGAGATAGCATGAAACAAATGAAGAAATGTGAAGAGAACAATAAGGGTAGTAGCATTTTGGCAAAGTTGAAAGCATGTAAAGCAGAGCTAAGTATGGTAATTTCAACATCCAAGGTAGCAATACTTGAAAATGGACAAGTTTTAGCAATTTCAAGCTTAGTGTTCTTGCTCATGAAAGTGGTGGAGAAGGTAGAGGAGTTGGTTCAAGAGGTCGAGGAACTTGGACAAAATGCTGCTTTTCGTATTAACATCACTATTCCACTTTCTTCTTAA 1251 0.3949 MESSHIISIVKVQMKKENNNKILPRDKHNETRNIIHSIKVGVSLVLVSLMYLLNPLFHQVGENAMWAVMTVIVIFEFSAGATLGKGFNRGMGTIVGGGLGWLAAIFAQSIGGVGNSIIIGTVGTYIRLIPRVKERYEYGVVTLMLTFNLVVMYGLRANEKVWEITRQRLLSILMGFIVCICVSLFIFPLWASDELHHSTVSTFHDLANTIQGCLEENGTLVSENESQLIAGFNFCNSVLNSKSEDELLANSARWEPWHGKFGFCYPWENYLKIASVLRELATFILVVGHSLQSSKQDMACLRQSHSEQLETCEAIGSRVAWALRELGDSMKQMKKCEENNKGSSILAKLKACKAELSMVISTSKVAILENGQVLAISSLVFLLMKVVEKVEELVQEVEELGQNAAFRINITIPLSS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal1g1932 416 Coils Coil 383 403 - -
Lal1g1932 416 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 20 407 - -
Lal1g1932 416 Pfam Aluminium activated malate transporter 28 400 IPR020966 GO:0015743
Lal1g1932 416 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 20 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal1g1932 Lal-Chr1 21475336 21477170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal1g1932 30 350 Miscellaneous Gene Families AT5G46600 38.690 2.94e-75 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal1g1932 - - gmx:100802201 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal1g1932 1 21475336 21477170 Lal1g1932 1 21475336 21477170 ECH
Lal1g1932 1 21475336 21477170 Lal24g0161 24 1176167 1180143 PCT