Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1526 ATGGTATATGAAGAAGTTTGTTATTTGAGTGGTGCAGTGGAGGGTGGAATGGGACTTATTTACCAGAAATGGATGTCAGGAAGTATGGTTTTGGGGAAGGTGGAGTCAACACTAAGGGAAGATACCACTTTTAATTCCTCCTCACTATCTTATCATCACTATTTGCACAAAGGAAGAAGATGCAGAAGAGGTCATAGAGTTATTGTTGCTACTGGTCCAGCAACAGAGGCTCCTGTTTTTGCCACTAAGCCTTTGAAAAAAGATGATCTCATTCATTACTTTGTATCTGGTTGCAAGCCCAAACAAAAGTGGAGAATAGGTACAGAGCATGAGAAGTTTGGCTTTGAGTTTGAAACTTTACATCCTATTAATTACAAACAAATAACATCTTTGCTTAATGGCATTGCTGTGAGGTTTGATTGGGATAAAATCATGGAAGGTGACAACATCATAGGACTCAAAAAGGGGAAGCAAAGCATATCATTAGAGCCTGGTGGTCAGTTAGAGCTTAGTGGCATGCCTTTGAAAACATTGCATCAGACTTATGATGAGATTAATTCACACCTCTATCAGGCTAAAACAGTTGCAGAGGAAATGGGAATTGGATTTTTGGGATTAGGTTTCCAACCTAAATGGAGAGTGGAAGACATGCCTCGAGTACCTAAGGTACGATATAACATTATGCAAAATTACTTCCATAAATTTGGCTTACCTGGAATTGAACCTTTGTTAATGACATGCTCTGTTCAGGTGAACTTGGATTTCAGTTCTGAAGCAGACATGATCAAGAAAATGCGTGCCAGTATTGCTTTACAGCCATTGGCAGCGGCCTTATTCGCAAATTCTCCCTTCGCAGAGGGAATTTCTAACGGTTTCTGCAGCATAAGAAGCCATAAGGTGGACCAGCTCGACAAATGTCGCACCGGCATGATTCCCTTTGTTTTTTATGACACATTTGGGTTTGAGCAGTACGTTGACTATGCTCTTGATGTGCCGATGATGTTTGTTTATCGAAACAACAAGTATATCGACTGTGGTGGCATGTCATTCCGGGACTTCATGGCAGGTAAACTCCCTGCTATTCCAGGCCAAGTACCAACTCTCAGTGACTGGGAGAATCATCTTACAACCATATTTCCTGAGGTCAGGCTAAGGAGATACATGGAAATGAGGGGTGCTGATGGGGGGCCTTTAAACATGTTATGTGCCTTGCCAGCTTTTTGGGTAGGTTTACTATATGATGAGGTTTCACTACATAATGTTCTAGATATGATTTCTGATTGGACCCCAGAAGACAGGCAGAATTTGAGGAATAAGGTTCCTATGACTGGTTTAAGGACTCCATTTCAAGGTAGAATGCTGCTACATGTTGCTGAAGATGTTTTGAAGTGGGCAAAGGATGGCTTAGACAGGAGATGCTTAAATGAATCAGTTTTTCTGGACCCATTGAAGGAAGTGGTTACAACAGGTTCAACACCAGCTGACAAACTTTTGAAGATGTATAATAACAAGTGGAGAAACAACATAGATCCTGTATTTAGAGAGTGTTGCTACTAA 1557 0.4104 MVYEEVCYLSGAVEGGMGLIYQKWMSGSMVLGKVESTLREDTTFNSSSLSYHHYLHKGRRCRRGHRVIVATGPATEAPVFATKPLKKDDLIHYFVSGCKPKQKWRIGTEHEKFGFEFETLHPINYKQITSLLNGIAVRFDWDKIMEGDNIIGLKKGKQSISLEPGGQLELSGMPLKTLHQTYDEINSHLYQAKTVAEEMGIGFLGLGFQPKWRVEDMPRVPKVRYNIMQNYFHKFGLPGIEPLLMTCSVQVNLDFSSEADMIKKMRASIALQPLAAALFANSPFAEGISNGFCSIRSHKVDQLDKCRTGMIPFVFYDTFGFEQYVDYALDVPMMFVYRNNKYIDCGGMSFRDFMAGKLPAIPGQVPTLSDWENHLTTIFPEVRLRRYMEMRGADGGPLNMLCALPAFWVGLLYDEVSLHNVLDMISDWTPEDRQNLRNKVPMTGLRTPFQGRMLLHVAEDVLKWAKDGLDRRCLNESVFLDPLKEVVTTGSTPADKLLKMYNNKWRNNIDPVFRECCY 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1526 518 SUPERFAMILY Glutamine synthetase/guanido kinase 96 506 IPR014746 GO:0003824
Lal23g1526 518 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 95 518 IPR035434 GO:0004357|GO:0006750
Lal23g1526 518 Gene3D - 70 518 - -
Lal23g1526 518 PIRSF GCL 71 518 IPR035434 GO:0004357|GO:0006750
Lal23g1526 518 PANTHER GAMMA GLUTAMYL CYSTEINE SYNTHETASE 95 518 - -
Lal23g1526 518 Pfam Glutamate-cysteine ligase family 2(GCS2) 138 428 IPR006336 GO:0004357|GO:0042398
Lal23g1526 518 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 86 518 IPR011556 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1526 Lal-Chr23 15418731 15422584 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1526 K01919 - gmx:100775188 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1526 23 15418731 15422584 Lal23g1526 23 15418731 15422584 ECH
Lal23g1526 23 15418731 15422584 Lal16g1214 16 8447342 8456345 PCT
Lal23g1526 23 15418731 15422584 Lal23g0250 23 2417238 2425516 PCT