Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g1214 ATGGTTGTGATTTCGCGAGCTGCACTATTCTCACACTGTTTCCGCAATGAGATAACAGCACGACATAACTTCAATGTGTCCAATGTTGCTGTTAATGTTCGGAAAACCTCTTTTGGTTTTTCGAATAGGGTTGTTGTTGGTAGTGGGTGTAGACGTAGCCAGAGTGTGATTGTTGGTGCTAGTCCTCCAACTGAAGATGCTGTTGTTGTTACTGAACCACTTACAAAGAAGGATCTTGTTGATTATCTCGCTTCTGGTTGTAAGACCAAGGATAAATGGAGAATAGGTACTGAGCATGAGAAGTTTGGTTTTGAGTTCAAGAGTTTGCGTCCTATGAAGTATGAGCAAATAGCAGAATTGCTGAATGGCATTGCCGAGAGATTTGATTGGGATAAAGTAATGGAGGGTGATAAAATTATTGGACTCATACAGGGGAAGCAGAGCATATCATTGGAGCCAGGAGGTCAATTTGAGCTTAGCGGTGCTCCTCTTGAAACCTTGCACCAGACTTGTGCCGAAGTTAATTCACATCTCTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGGATTGGATTTTTGGGTATTGGTTTTCAGCCGAAGTGGGCAATCAAAGACATACCTATAATGCCGAAGGGAAGATATGAAATTATGAGGAATTACATGCCCAAAGTTGGTTCTCTTGGTCTTGACATGATGTTCCGGACATGCACTGTACAGGTCAATCTTGACTTTAGTTCTGAGGCTGACATGATCCGGAAATTCCGTGCTGGCCTAGCTTTACAGCCTATAGCAACTGCTCTTTTTGCTAATTCACCCTTCAAAGAAGGAAAGCCAAATGGTTTTGTCAGTTTAAGAAGCCATATTTGGACTGATACTGATAACGACCGCTCAGGCATGCTGCCCTTTGTTTTTGATGACTCGTTCGGGTTTGAGCAGTATGTGGATTATGCTCTTGATGTTCCTATGTATTTTGTCTATCGCAACAAGAAATATGTTGACTGTACTGGCATGACCTTCAGGGACTTCTTGGCAGGAAAGCTTCCCTCTATTCCTGGTGAATTACCAACCCTCAATGACTGGGAGAATCACTTGACAACCATATTTCCTGAGGTCAGACTGAAGAGGTATTTGGAGATGAGAGGCGCTGATGGAGGGCCTTGGAGAAGGTTATGCGCTTTACCAGCATTTTGGGTAGGGTTATTGTACGATGAGGTTTCTCTTCAAAATGTTTTAGATATTACAGCAGATTGGACTTCAGAAGAAAGAGAAATGCTAAGGAATAAGGTTCCTGTCACTGGTCTAAAAACGCCATTCCGAGACGGTTTGCTGAAGCATGTTGCTGAAGATGTTCTAAAGTTGGCAAAGGATGGCTTGGAAAGAAGAGGCTACAAGGAATCGGGATTTTTGAATGAGGTAGCCGAGGTAGTTAGAACAGGTGTGACCCCAGCTGAGAAGCTTTTGGAATTGTACAATGGAAAATGGGAGCAATCTGTAGATCGTGTATTTGAGGAACTGCTTTATTAA 1524 0.4278 MVVISRAALFSHCFRNEITARHNFNVSNVAVNVRKTSFGFSNRVVVGSGCRRSQSVIVGASPPTEDAVVVTEPLTKKDLVDYLASGCKTKDKWRIGTEHEKFGFEFKSLRPMKYEQIAELLNGIAERFDWDKVMEGDKIIGLIQGKQSISLEPGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEEMGIGFLGIGFQPKWAIKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFKEGKPNGFVSLRSHIWTDTDNDRSGMLPFVFDDSFGFEQYVDYALDVPMYFVYRNKKYVDCTGMTFRDFLAGKLPSIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQNVLDITADWTSEEREMLRNKVPVTGLKTPFRDGLLKHVAEDVLKLAKDGLERRGYKESGFLNEVAEVVRTGVTPAEKLLELYNGKWEQSVDRVFEELLY 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g1214 507 PANTHER GLUTAMATE--CYSTEINE LIGASE 40 507 - -
Lal16g1214 507 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 40 507 IPR035434 GO:0004357|GO:0006750
Lal16g1214 507 Pfam Glutamate-cysteine ligase family 2(GCS2) 125 417 IPR006336 GO:0004357|GO:0042398
Lal16g1214 507 SUPERFAMILY Glutamine synthetase/guanido kinase 85 505 IPR014746 GO:0003824
Lal16g1214 507 Gene3D - 59 507 - -
Lal16g1214 507 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 73 507 IPR011556 GO:0004357|GO:0006750
Lal16g1214 507 PIRSF GCL 60 507 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g1214 Lal-Chr16 8447342 8456345 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g1214 K01919 - qsu:111985770 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g1214 16 8447342 8456345 Lal16g1214 16 8447342 8456345 ECH
Lal16g1214 16 8447342 8456345 Lal23g0250 23 2417238 2425516 LSH
Lal23g1526 23 15418731 15422584 Lal16g1214 16 8447342 8456345 PCT