Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g0250 ATGACTATGATTTCTCGATCCTCATACTGTATCCGCAATAAGATAATTTCACAACACAATGTTGTTGTTGTTGCTAATGTTAGAAAAACCTCTTTTGGGTTTTCGAATAAGGTTGTTTCTGTTGCTGCTGGGAGTAGAAAAAGGTGCAGTGTGATTGTTGGTGCTAGTCCTCCTACTGAAGATGCTGTTGTTGTTACTGAACCACTTACAAAAAAGGATCTTGTTGATTATCTTGCTTCTGGGTGTAAGACTAAGGATAAATGGAGAATAGGCACTGAACATGAGAAGTTTGGTTTTGAGTTGGGGAGCTTGCGCCCTATGAAGTATGAGCAAATAGCAGATCTGCTGAATGGCATTGCTGAGAGATTTGATTGGGATAAAGTAATGGAGGGCAATAAAATTATTGGACTCAAACAGGGGAAGCAGAGCATATCGTTGGAGCCAGGTGGTCAATTTGAGCTTAGCGGTGCCCCTGTTGAAACCTTGCATCAGACTTGTGCTGAAGTTAATTCACATCTCTATCAGGTTAAAGCTGTTGCTGAGGAAATGGGGATTGGATTTTTAGGTCTTGGTTTTCAGCCAAAGTGGGCCATCAAAGACATACCTATAATGCCAAAGGGAAGGTATGAGATTATGAGGAATTACATGCCCAAAGTTGGTTCTCTTGGTCTTGACATGATGTTCAGGACATGCACTGTACAGGTCAATCTTGACTTTAGTTCCGAGGCTGATATGATCAGGAAATTCCGCGCTGGCCTAGCTTTACAGCCTATAGCGACAGCTCTTTTTGCTAATTCACCCTTCAAAGAAGGAAAGCCAAATGGTTTTGTCAGTTTGAGAAGCCATATTTGGACTGATACCGATAAGGATCGCTCAGGCATGCTGCCATTTGTTTTTGATAGCTCATTTGGGTTTGAGCAGTATGTGGATTATGCTCTTGATGTTCCAATGTATTTTGTGTATCGGAACAAGAAATATGTAGACTGTACTGGAATGACCTTCAGGGACTTCTTGGCAGGAAGGCTTCCCTGTATTCCCGGTGAATTACCAACCCTCAATGATTGGGAAAATCACTTGACAACCATATTTCCCGAGGTCCGGCTGAAGAGGTATTTGGAGATGCGAGGCGCTGACGGCGGGCCTTGGCGAAGATTATGTGCCTTACCGGCATTTTGGGTCGGGTTATTGTACGACGAGATTTCTCTTCAAAATGTTTTAGATATTACAGAAGATTGGACTTCAGAAGAAAGAGAAATGCTAAGGAATAAGGTTCCTGTTACGGGTCTAAAGACGCCATTCCGAGACGGCTTGCTAAAGCATGTTGCCGAAGATGTTCTAAAGCTGGCAAAGGATGGTTTGGAAAGAAGAGGCTTCAAGGAATCAGGATTTTTGAATGAGGTAGCTGAGGTGGTTAGAACAGGTGTGACCCCAGCAGAGAGGCTTTTGGAATTGTATAATGGAAAGTGGGAAGAATCTATAGATAATGTATTTGAGGAATTGCTATATTGA 1509 0.4248 MTMISRSSYCIRNKIISQHNVVVVANVRKTSFGFSNKVVSVAAGSRKRCSVIVGASPPTEDAVVVTEPLTKKDLVDYLASGCKTKDKWRIGTEHEKFGFELGSLRPMKYEQIADLLNGIAERFDWDKVMEGNKIIGLKQGKQSISLEPGGQFELSGAPVETLHQTCAEVNSHLYQVKAVAEEMGIGFLGLGFQPKWAIKDIPIMPKGRYEIMRNYMPKVGSLGLDMMFRTCTVQVNLDFSSEADMIRKFRAGLALQPIATALFANSPFKEGKPNGFVSLRSHIWTDTDKDRSGMLPFVFDSSFGFEQYVDYALDVPMYFVYRNKKYVDCTGMTFRDFLAGRLPCIPGELPTLNDWENHLTTIFPEVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEISLQNVLDITEDWTSEEREMLRNKVPVTGLKTPFRDGLLKHVAEDVLKLAKDGLERRGFKESGFLNEVAEVVRTGVTPAERLLELYNGKWEESIDNVFEELLY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g0250 502 SUPERFAMILY Glutamine synthetase/guanido kinase 80 500 IPR014746 GO:0003824
Lal23g0250 502 TIGRFAM glu_cys_lig_pln: glutamate--cysteine ligase 68 502 IPR011556 GO:0004357|GO:0006750
Lal23g0250 502 PANTHER GLUTAMATE--CYSTEINE LIGASE 36 502 - -
Lal23g0250 502 Pfam Glutamate-cysteine ligase family 2(GCS2) 116 412 IPR006336 GO:0004357|GO:0042398
Lal23g0250 502 PIRSF GCL 55 502 IPR035434 GO:0004357|GO:0006750
Lal23g0250 502 Gene3D - 54 502 - -
Lal23g0250 502 PANTHER GLUTAMATE--CYSTEINE LIGASE, CHLOROPLASTIC 36 502 IPR035434 GO:0004357|GO:0006750
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g0250 Lal-Chr23 2417238 2425516 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g0250 K01919 - gmx:547545 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g0250 23 2417238 2425516 Lal23g0250 23 2417238 2425516 ECH
Lal16g1214 16 8447342 8456345 Lal23g0250 23 2417238 2425516 LSH
Lal23g1526 23 15418731 15422584 Lal23g0250 23 2417238 2425516 PCT