Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1476 ATGGGGTGCTGCCATTCACGGATAGAGAGAGAAGAAACTGTGTCAAGATGCAAAGCAAGGAAGCGTTACATGAAGCAGTTTGTTGAAGCAAGATACGCTTTTTCTGCAGCGCATGCTATGTACATTCACTCTCTACGTGCCACTGCTTCTGCTCTTCTTCACTTTGCAACTGTTGAAACCACCACCATTTTCCACCACCACCAACAACAACACCATCATCTTCCACCGGAACCACCACAACCTATACTTCCCTCACCGCCGCCGATGACAACAATGCCACAACCACCGCCACCTATGAGTCCAAGTTCAGATACTTGGACATCATCAATGACTGCCTCCCCTCTTCCTCCGCCGCCTCCGCCGCCGATGGCTTCCTCCTCCTGGGACTTCTGGGACCCGTTCATGCACCCACATCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTCAAGGTCTGCTATTGAAGAAGAGTGGGAAGCTACTACCACCACAGGGTCTGAAGTGGTGGTCATGGCGGCGGCGAGCAAGACGGCGCCGCCATCTAGTGTGAGCGGGTTTTCCAAGGAGACTAAAACAAGTAGCGAGCTTGCAATGGTTGTACCTAGAAACAGTAAGGATCTTGTTGAAGTTATGAAAGAGCTTAATGACTATTTTCTCGAAGCTGCTAATGCTGGTGCTCATGTTTCTTTCTTACTTGAAGTTCCAAGTTCTGCTTTTTCTGATCACAAAAAAGGAGGTAAAGCATCTGGCTATGGATGGAGTCTAGGTCCGTCCTTGTGGGCATTGGGTTCGAGTCCGAAACTGAACGGATTTGGCAAACTGGCTGAGGGAACACCTCATTTTCCAGTTGGTAATTTTGGGGCAAATGGTTTTAGAAATGGTAGCCACAGCTCCACTGTGGAGAGGCTTTATGCATGGGAGAAGAAATTGTACCAAGAGGTCAAGATTTCTAAGACAGTAAAAATGGAGCATGAGAAGAAGGTGGAACTGCTAAGGAAGCTAGAGATGAAAAGGGCTGATTACATGAAGACAGAAAAAACAAAAAAAGAGGTGGAGAAATTAGAGTCACAGATGATGGTTGCTTCTCAGGCCATTGATAGTACATCTACTGAAATCATCAATCTAAGGGAGATAGAGCTCTACCCTCAACTCATTGAGCTTGTCAAAGGATTGATGTGCATGTGGAGAGGCATGTATGAGTGTCATCAAGTCCAAAAGCACATAGTTCAACAACTGGAATATCTCAACACAATACCATCAACCAACCCCACTTCTGAGATTCATAAGCAGGCAACTCTTCAGCTAGAGCTTCAAGTACAGCAGTGGCACCAATCCTTCTGCAACCTATTCAAAGCCCACAGGGATTATATCCAATCCCTCACATGTTGGCTAAGGCTCAGCCTTTTGCACTTTAGCCGAAACCCGCTGAGTAGAACCACAGAAGAGTCAAAGATAGTTTCTCTTTGTGAAGAATGGAACCTTGCTGTTGATCGTATACCGGACAAGGTGGCATCGGAAGCAATCAAAAGCTTGTTGACCGTTATTCATGCTATTGTAGTTCAACAAACAGAAGAGCATAAACAAAAGAAGAGGTCAGGTTCTGCATTTAAAGACCTTGAGAAGAAAGTGGTTCAGCTTAGATCCTTGGAGTGCAAGTATGGTCCATACTCCATGCGTGAATCCTCTGGTGGCATGAGAACCAAGGACCCTGTGACTGAGAAGCGTGTTAAGGTGGAAACTTTGAAAGCGAAGGCTGAGGAGGAGAAGAACAGATATGAAAAGTCCGTAAGTATAACAAGGGCAATGACACTGAATAACTTGCAGATGGGTTGCCCACATGTTTTCCAGGGGATTGTGGGGTTTTCAAGTGTGTGCATGGAGGTTTTTGAATCTGTATACAACAAAGCCAAACTCTATGAACAGGAGCATGATGTGAAGAGAATATTACCATAG 1956 0.4591 MGCCHSRIEREETVSRCKARKRYMKQFVEARYAFSAAHAMYIHSLRATASALLHFATVETTTIFHHHQQQHHHLPPEPPQPILPSPPPMTTMPQPPPPMSPSSDTWTSSMTASPLPPPPPPPMASSSWDFWDPFMHPHPPPPPPPPPPSSSRSAIEEEWEATTTTGSEVVVMAAASKTAPPSSVSGFSKETKTSSELAMVVPRNSKDLVEVMKELNDYFLEAANAGAHVSFLLEVPSSAFSDHKKGGKASGYGWSLGPSLWALGSSPKLNGFGKLAEGTPHFPVGNFGANGFRNGSHSSTVERLYAWEKKLYQEVKISKTVKMEHEKKVELLRKLEMKRADYMKTEKTKKEVEKLESQMMVASQAIDSTSTEIINLREIELYPQLIELVKGLMCMWRGMYECHQVQKHIVQQLEYLNTIPSTNPTSEIHKQATLQLELQVQQWHQSFCNLFKAHRDYIQSLTCWLRLSLLHFSRNPLSRTTEESKIVSLCEEWNLAVDRIPDKVASEAIKSLLTVIHAIVVQQTEEHKQKKRSGSAFKDLEKKVVQLRSLECKYGPYSMRESSGGMRTKDPVTEKRVKVETLKAKAEEEKNRYEKSVSITRAMTLNNLQMGCPHVFQGIVGFSSVCMEVFESVYNKAKLYEQEHDVKRILP 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1476 651 MobiDBLite consensus disorder prediction 134 151 - -
Lal23g1476 651 MobiDBLite consensus disorder prediction 74 102 - -
Lal23g1476 651 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Lal23g1476 651 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 636 - -
Lal23g1476 651 Coils Coil 572 596 - -
Lal23g1476 651 MobiDBLite consensus disorder prediction 112 126 - -
Lal23g1476 651 PANTHER UNCHARACTERIZED 1 636 - -
Lal23g1476 651 Coils Coil 345 372 - -
Lal23g1476 651 Pfam Protein of unknown function (DUF632) 208 517 IPR006867 -
Lal23g1476 651 MobiDBLite consensus disorder prediction 64 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1476 Lal-Chr23 15089244 15094538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1476 206 595 Acyl Lipid Metabolism Gene Families AT2G27090 30.841 1.17e-42 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1476 - - gmx:102662030 897.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1476 23 15089244 15094538 Lal23g1476 23 15089244 15094538 ECH
Lal16g0131 16 779561 782852 Lal23g1476 23 15089244 15094538 LSH
Lal15g0093 15 639056 642672 Lal23g1476 23 15089244 15094538 LSH