Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0093 ATGGGGTGTTGCCATTCAAGAATAGACAGAGAAGAATCTGTGTCTAGATGCAAAGCAAGGAAGCGTTACATGAAGCAGTTTCTTCAAGCAAGACACGCTTTTTCCGCAGCGCATTCTATGTACATTCGTTCTCTACGTGCCACTGGTTCTGCTCTTCTCCGTTTTGCAAATGCTGAAACCACTACCACCCACTTCCACCACCATCTTCCACCTGACCCACCACAACCTATACTTCCATCACCGCCGCCGCCCATGAGTCCAAGTTCAGATACTTGGACTTCATCACTAACTGCCTCACCTCTTCCTCCGCCGCCGCCGCCGCCCGTAGCTTCATCCGGCTGGGATTTCTGGGACCCATTCATGCAGCCACATCCTCCCCCTCCTCCTTCTAGGTCTGCTATTGAGGAAGACTGGGAAGCTACTACCACCACTACTGGCTCTGAAGTGGTGGTCATGCCCCCTGGTGTGGCGGCGAGCATGACGGCGCCTCCGTCTATGGTGAGCGAGTTTTCCAAGGATACCAAAGCAAGTAGTGAGCTTGCAGTGGTGGCGTCAAGGAATAGCAAGGATATGGTTGAAGTTATCAAAGAGCTTAATGACTATTTTCTCGAAGCTGCTAGTGCTGGTTCCCATGTTTCTTTTCTTCTTGAAGTTCCAAGTTCTGGTTTTTCTGATCACAATAAAGGAGGCAAAGTATTAAGCTATGGATGGAGTCTGGGTCCATCATTGTGGGCATGGGGGTTGAGTCCAAAACTGAACGGGTTTAGCAAGCTGGTTGAGGGAACACCTCATGTTTCAGTTGGTAATTTTGGGGCTAATGGTTTTACAAATGGTGGCCATTGCTCCACTGTGGAGAGGCTCTATGCATGGGAGGAGAAATTGTACCAAGAGGTCAAGATTTGTAAGACAGTAAAAATGGAGCATGAGAAGAAGGTGGAACTGCTAAGGAAGCTAGAGATGAAGAGGGGTGACTATGTGAAGACAGAGAAGACAAAGAAAGAGGTAGAGAAATTAGAATCACAGATGATTGTAGCTTCTCAGGCCATTGATAGTACATCTGCCGAAATCGTCAAATTAAGGGAGATAGAGCTCTACCCTCAACTCATTGATCTCGTCAAAGGATTGATGTGCATGTGGAGAAGCATGTATGAGTGTCATCAAGTCCAAAAGCACATAGTTCAGCAACTAGAATACCTCAACACAATACCATCAACCAACCCCACTTCTGAGATTCATAGGCAGACAACTCTTCAGCTAGAGCTTCAAGTACAGCAATGGCACCAATCCTTCTGCAATCTCTTCAAGGCTCACAGGGACTATATTCAATCCCTCACATGTTGGCTAAGGCTCAGCCTTTTGCAGTTTAGCCGAAACCCACTGAGCAGAACCACAGAAGAGTCAAAGATAGTATCTCTTTGTGAGGAATGGCACCTTGCTGTTGATCGTATTCCAGACAAGGTGGCATCTGAAGGAATCAAAAGCTTGTTGACAGTTATTCATGCTATTGTAGTTCAACAGACGGAAGAGCATAAACAAAAGAAGAGGTCAGATTCTGCATTTAAAGAGCTTGAGAAGAAGGTGGTTCAGCTTAGATCCTTGGAGTGCAAATATGGTCCATACTCAATGCATGAATCCTCAGGTACCATGAGAACCAAGGACTCTGTCACCAAGAAGCGTGTAAAGGTGGAAACTTTAAGAGCAAAGGCCGAGGAGGAGAAGAACAAATATGAAAAATCAGTGAGTGTCACAAGGGCCATGACACTGAATAACCTGCAGATGGGTTGCCCACATGTTTTCCAGGGGATTGTGGGGTTTTCAAGTGTGTGCATGGAGGTTTTTAAATCGGTATACAACAATGCCAAACTCTCTGATCAGGAGCATGATGTGAAGAGAATATTACCATAG 1905 0.4609 MGCCHSRIDREESVSRCKARKRYMKQFLQARHAFSAAHSMYIRSLRATGSALLRFANAETTTTHFHHHLPPDPPQPILPSPPPPMSPSSDTWTSSLTASPLPPPPPPPVASSGWDFWDPFMQPHPPPPPSRSAIEEDWEATTTTTGSEVVVMPPGVAASMTAPPSMVSEFSKDTKASSELAVVASRNSKDMVEVIKELNDYFLEAASAGSHVSFLLEVPSSGFSDHNKGGKVLSYGWSLGPSLWAWGLSPKLNGFSKLVEGTPHVSVGNFGANGFTNGGHCSTVERLYAWEEKLYQEVKICKTVKMEHEKKVELLRKLEMKRGDYVKTEKTKKEVEKLESQMIVASQAIDSTSAEIVKLREIELYPQLIDLVKGLMCMWRSMYECHQVQKHIVQQLEYLNTIPSTNPTSEIHRQTTLQLELQVQQWHQSFCNLFKAHRDYIQSLTCWLRLSLLQFSRNPLSRTTEESKIVSLCEEWHLAVDRIPDKVASEGIKSLLTVIHAIVVQQTEEHKQKKRSDSAFKELEKKVVQLRSLECKYGPYSMHESSGTMRTKDSVTKKRVKVETLRAKAEEEKNKYEKSVSVTRAMTLNNLQMGCPHVFQGIVGFSSVCMEVFKSVYNNAKLSDQEHDVKRILP 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0093 634 PANTHER UNCHARACTERIZED 1 619 - -
Lal15g0093 634 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lal15g0093 634 MobiDBLite consensus disorder prediction 69 88 - -
Lal15g0093 634 MobiDBLite consensus disorder prediction 63 132 - -
Lal15g0093 634 Coils Coil 555 579 - -
Lal15g0093 634 MobiDBLite consensus disorder prediction 98 112 - -
Lal15g0093 634 Pfam Protein of unknown function (DUF632) 191 500 IPR006867 -
Lal15g0093 634 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0093 Lal-Chr15 639056 642672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0093 1 92 Acyl Lipid Metabolism Gene Families AT2G27090 33.981 7.46e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0093 - - aprc:113869576 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0131 16 779561 782852 Lal15g0093 15 639056 642672 LSH
Lal15g0093 15 639056 642672 Lal23g1476 23 15089244 15094538 LSH