Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0131 ATGGGTTGCTGTCATTCAAGAATAGAGATAGAAGAAACAGTGTTAAGATGCAAAGCAAGGAAGCGCTACATGAAACAGTTTGTTGACGCTAGAAACGCTTTTTCCGTGTCGCATTCTATGTACATTCGTTCTCTACGTGCCACTGCTTCTGCTCTTCTTCACTTCGCAAATGCTGAAAACACCACCACCACTCTCTTCCACCACCACCTCCATCACCACCATCTTCCACCTGAACCAATACAACCTATACTTCCATCAATGCCTCCTCTAACACCCATGCCGACACCGCCGATATGTCCTAGCTCAGATATGTGGACATCACCCGTCACTGCCTCCCCTCTTCCCCCGCCGCCCCCGCCGCCGGTATATCCCTCCGCCTGGGATTTCTGGGACTCGTTCATGCAGCCACATCCACCTTCAACTACTGCCATTGACGAAGAGTGGGAAGCTACCAAAACTATTACTGAGTCCGAGGTGGTGGTTGTGGCTCCTGGTGTGGCGGCGAGCATTACGGTTCCGCCGCCTATAGTTAGCGGGTTTTTCGATGAGACTAAAACAAATGGTGGGCGTGCAATGGTAGTGTCAGGGAATAACAAGGATCTGGTTGAAGTTATCAAAGAGCTTGATGATTATTTTCTCAAAGCTGCCGATGCTGGTGCTCATGTTTCTTTCCTACTTGAAGTTCCAAATTCTGATTTTTCTGATCACAACAAAGGAAGTAAAGTATCCAGCTATAGATGGAACCAAGGACCATCGTCGTGGGCATGGGGTTTGAGTGGACTTAGCAAGCTGGCCGAGGGAACACCTCATGTTTCAGTGGATAATGTTGTGACTAATGGTTTTAGAAATGGTGGCCACTGCTCCACCGTGCAGAGGCTATATGCATGGGAGAAGAAGTTGTACCAGGAAGTCAAGATTTGTAAGACATTAAAAATGGAGCATGAGAAGAAGGTGGAACTGCTAAGGAAACTAGAGATGAAGAGGGCTGAGAATTTGAAGATAGAGAAGACAAAAAAAGAGGTGGAGAAGTTAGAATCAGTAATGATGGTTGCTTCTCAGGCCATTCATAGTATATCTGCTGAAATAATCAAATTAAGGGAGACAGAGCTATACCCTCAACTCATTGAGCTTGTCAAAGGATTGATGTGCATGTGGAGAAGCATGTATGAGAGTCATCAAGTCCAAAAGCACATAGTTCAGCAACTGGAATACCTCAACACAATACCATCAACCAACCCCACTTCTGAGATTCATAAGCAAGCAACTCTTCAGCTAGAGCTTCAAGTACAGCAATGGCACCAATCCTTCTGCAACCTCTTCAAGGCTCATAGGGATTATATCCAATCCCTCACATGTTGGCTAAGGTTCAGCCTTTTGCAGTTTAGCAGAAACCAGCTGAGCAGAACCACAGAAGAGTCAAAGATACTATCTCTTTGTGAAGAATGGCATCTTGCTGTTGATAGGATACCAGAGAAGGTAGCATCCGAAGGAATCAAAAGCTTGTTGGCAGTTATTAATGCTATTGTAGTCCAACAGACAGAAGAACATAAACAAAAGAAGAGGTCAGATTCTGCATTTAAAGAGCTTGAGAAGAAAGTGGATCAGCTTAGATCCTTGGAATGCAAGTATGGTCCATACTCCATGCATGAATCCTATGGTAGCTTGAGAATCAAGGACTCTGTGACTGAGAAGCGTGTTAAGGTGGAAATTTTGAAAGCAAAGGCTGAAGAGGAGAAGAGCAAATATGAAAAGTCTGTAAGTATAACAAGGGCAATGACTGTGAATAGCTTGCAGATGGGTTTTCCACATGTTTTCCAGGGGATTGTGGTGTTTTCAAATGTGTGCATGGAGATTTTTGAATCAGTATACAACTTAGCCAAACTCTATGATCATGAGCATGATGTGAAGAGAATATTACCCAAGGAGAACTGA 1932 0.4431 MGCCHSRIEIEETVLRCKARKRYMKQFVDARNAFSVSHSMYIRSLRATASALLHFANAENTTTTLFHHHLHHHHLPPEPIQPILPSMPPLTPMPTPPICPSSDMWTSPVTASPLPPPPPPPVYPSAWDFWDSFMQPHPPSTTAIDEEWEATKTITESEVVVVAPGVAASITVPPPIVSGFFDETKTNGGRAMVVSGNNKDLVEVIKELDDYFLKAADAGAHVSFLLEVPNSDFSDHNKGSKVSSYRWNQGPSSWAWGLSGLSKLAEGTPHVSVDNVVTNGFRNGGHCSTVQRLYAWEKKLYQEVKICKTLKMEHEKKVELLRKLEMKRAENLKIEKTKKEVEKLESVMMVASQAIHSISAEIIKLRETELYPQLIELVKGLMCMWRSMYESHQVQKHIVQQLEYLNTIPSTNPTSEIHKQATLQLELQVQQWHQSFCNLFKAHRDYIQSLTCWLRFSLLQFSRNQLSRTTEESKILSLCEEWHLAVDRIPEKVASEGIKSLLAVINAIVVQQTEEHKQKKRSDSAFKELEKKVDQLRSLECKYGPYSMHESYGSLRIKDSVTEKRVKVEILKAKAEEEKSKYEKSVSITRAMTVNSLQMGFPHVFQGIVVFSNVCMEIFESVYNLAKLYDHEHDVKRILPKEN 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0131 643 PANTHER UNCHARACTERIZED 1 623 - -
Lal16g0131 643 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 623 - -
Lal16g0131 643 Coils Coil 327 354 - -
Lal16g0131 643 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lal16g0131 643 Coils Coil 519 539 - -
Lal16g0131 643 Pfam Protein of unknown function (DUF632) 201 506 IPR006867 -
Lal16g0131 643 Coils Coil 558 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0131 Lal-Chr16 779561 782852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0131 1 59 Acyl Lipid Metabolism Gene Families AT2G27090 33.898 1.04e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0131 - - aprc:113869576 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0131 16 779561 782852 Lal15g0093 15 639056 642672 LSH
Lal16g0131 16 779561 782852 Lal23g1476 23 15089244 15094538 LSH