Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1382 ATGTTTATGTCATCCATGGCCACTCCTGTTTTCCTCATTTATCTCTACCTTCTCTTCTACTCTCATGCCACTGCCCAACGCTTCAAAGAGGCCCCTAAATTCTACAACTCCCCTAACTGCCCCAACATCATTCTCCAACCCACCCTCACGTGTTCCCCTCATGCTGTCCACGTGGCCATGACACTTGACGTCACCTACCTCCGCGGCTCAATGGCTGCAATCCTTTCCGTTCCCCAACACTCCTCCTGTCCCGAAAACATTATATTCCACTTTGTCACCGCCGCATCCAATTTCAACTCCACCACCGTCCTCAACCGCACACTCTCCACCTCCTTCCCTTACCTCAAATTCCAATTCTACCCTTTCGATGACCATTCTGTCGCTTCCTTCATCTCCACTTCAATCCGTTCCGCATTAGACTGTCCTCTCAACTACGCTCGCAACTACTTGGCCAACCTTCTCCCACCATGTGTTCATAAAATTGTCTACCTTGATTCTGATCTCGTCCTCGTCGACGACATTGCAAAACTCGCCGCCACGCCGCTCTCCGACGACGTTGTCCTCGCTGCACCAGAATACTGCAACGCTAACTTCAGCTCCTATTTCACTCCCACGTTCTGGTCCAACCCATCACTCTCACTCACGTTCGCAGGTCGCATGGCATGCTACTTCAACACCGGCGTCATGGTCATCGACTTAGCGCGGTGGCGGGCTGGGGATTACACGACAAAGATAGAGGAATGGATGGAACTACAGAAGAGAATGAGGATCTACGAGCTCGGGTCTCTTCCGCCGTTTCTTTTAGTATTCGCCGGAAATATAGGCCCGGTGGATCACAGATGGAACCAGCACGGACTTGGAGGAGATAACTTCCACGGGCTTTGCCGGGATTTGCATCCAGGCCCGGTGAGCCTGCTGCATTGGAGTGGGAAGGGAAAGCCATGGGCCAGGCTGGACGCCAACCGCCCTTGCCCCTTGGATGCGTTATGGGCTCCGTATGATCTGCTGGAAACGCGTTTTGCTCTCGAGGCCTAG 1035 0.5314 MFMSSMATPVFLIYLYLLFYSHATAQRFKEAPKFYNSPNCPNIILQPTLTCSPHAVHVAMTLDVTYLRGSMAAILSVPQHSSCPENIIFHFVTAASNFNSTTVLNRTLSTSFPYLKFQFYPFDDHSVASFISTSIRSALDCPLNYARNYLANLLPPCVHKIVYLDSDLVLVDDIAKLAATPLSDDVVLAAPEYCNANFSSYFTPTFWSNPSLSLTFAGRMACYFNTGVMVIDLARWRAGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGNIGPVDHRWNQHGLGGDNFHGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLETRFALEA 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1382 344 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 57 324 IPR029044 -
Lal23g1382 344 PANTHER HEXOSYLTRANSFERASE 19 344 - -
Lal23g1382 344 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 19 344 - -
Lal23g1382 344 SUPERFAMILY Nucleotide-diphospho-sugar transferases 56 335 IPR029044 -
Lal23g1382 344 Pfam Glycosyl transferase family 8 57 317 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1382 Lal-Chr23 14488766 14489800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1382 11 342 Glycosyltransferase AT3G50760 70.414 5.36e-177 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1382 K20893 - gmx:100783054 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1382 23 14488766 14489800 Lal23g1382 23 14488766 14489800 ECH
Lal15g0144 15 1000007 1001026 Lal23g1382 23 14488766 14489800 LSH
Lal23g1382 23 14488766 14489800 Lal16g1519 16 12326486 12327562 PCT
Lal16g1519 16 12326486 12327562 Lal23g1382 23 14488766 14489800 PCT