Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0144 ATGGCATCCATTATGACCATTCCTATTCTCCTTATTTCTTTGTTTCTTCTCTTCTCGTCTTATACAGCTGCCCAACGCTTCAAAGAAGCACCAAAATTCTACAACTCTCCTAATTGCCCCTCCATCGATCTCACGTGCTCACCCCATGAAGTGCACGTGGCCATGACACTCGACGTAACATACCTTCGCGGTTCAATGGCTGCAATCCTCTCCGTTCTCCAACACTCTTCTTGTCCTGAAAACATTATCTTCCACTTTGTCACCGCCGCTTCCAAAATCTTCTCCACCACCATCCTCAACCGCACACTCTCCACCTCTTTCCCTTACCTCAATTTCCATTTCTACCCTTTTGACGACGATTCCGTCGCTGGCTTTATCTCCACTTCAATACGATCCGCACTAGACTGTCCTCTCAATTATGCTCGCAACTATATGGCAAACTTACTCCCTCCATGCGTTAAAAAAATCGTCTACCTTGACTCTGATCTCATCCTCGTCGACGACATTGCAAAACTCGCCGCCACGCCACTCCCCGATGAGGCTGTCCTCGCCGCACCAGAATACTGCAACGCCAACTTTAGCTTCTATTTTACTCCCACGTTCTGGTCCAACCCATCACTCTCGCTCACCTTCGCGGGCCGCAGGGCCTGCTATTTCAACACCGGCGTCATGGTCATCGACTTAGAGCGGTGGCGGGCAGGGGATTACACGAGAAAGATAGAGGAATGGATGGAACTCCAGAAGAGAATGCGGATCTACGAGCTCGGTTCTTTGCCTCCGTTTCTTTTGGTATTCGCCGGAAATATAGGTCCGGTGGATCACAGGTGGAACCAACACGGGCTAGGTGGAGATAACTTCCGTGGGCTTTGCCGTGAGTTGCATCCAGGCCCGGTGAGCCTGTTGCATTGGAGTGGCAAAGGAAAGCCGTGGGCCAGGCTTGACGCTAACCGCGCCTGCCCTTTGGATGCTTTATGGGCTCCCTACGATCTTCTGGAAACACGTTTCTCTCTCGAGGTCTAG 1020 0.5118 MASIMTIPILLISLFLLFSSYTAAQRFKEAPKFYNSPNCPSIDLTCSPHEVHVAMTLDVTYLRGSMAAILSVLQHSSCPENIIFHFVTAASKIFSTTILNRTLSTSFPYLNFHFYPFDDDSVAGFISTSIRSALDCPLNYARNYMANLLPPCVKKIVYLDSDLILVDDIAKLAATPLPDEAVLAAPEYCNANFSFYFTPTFWSNPSLSLTFAGRRACYFNTGVMVIDLERWRAGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGNIGPVDHRWNQHGLGGDNFRGLCRELHPGPVSLLHWSGKGKPWARLDANRACPLDALWAPYDLLETRFSLEV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0144 339 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 52 320 IPR029044 -
Lal15g0144 339 SUPERFAMILY Nucleotide-diphospho-sugar transferases 51 330 IPR029044 -
Lal15g0144 339 PANTHER HEXOSYLTRANSFERASE 10 339 - -
Lal15g0144 339 Pfam Glycosyl transferase family 8 52 312 IPR002495 GO:0016757
Lal15g0144 339 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0144 Lal-Chr15 1000007 1001026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0144 9 337 Glycosyltransferase AT3G50760 70.623 1.62e-178 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0144 K20893 - gmx:100783054 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0144 15 1000007 1001026 Lal23g1382 23 14488766 14489800 LSH
Lal15g0144 15 1000007 1001026 Lal16g1519 16 12326486 12327562 PCT
Lal16g1519 16 12326486 12327562 Lal15g0144 15 1000007 1001026 PCT