Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1258 ATGACTGATTCTTCCAAAAGACATTGCCTCTTAGAAGAGGACAATGGTTTGGCTTTCATTGCTGACACAGATGGTGGGTTGAAAGGCCACTATCCTTACCATTACCAACATGGTTTTGTGTCTAGGACTTTGGGTTACGCTTACCCAATTTCTTCACTTAGATCTGCCAGATTTTATGATGCCAGGTTTGAAGATCACATACCCCATTTCCTTCAAGCTTGTTTTCTTTGCAAAAAACCTCTTGGAAACAATAGAGACATCTTCATGTACAGAGGGGACACGCCATTTTGCAGTGATGATTGCAGGCAAGAACAAATAGAGATGGACGAAGCCAAAGAGAAGAATAAGAACCTTTCTTCAATGAAGGCTTTGAGAAAAAAAGAGAAAAACAAATCTATCAAATCTGCTTCACCAAACAAGTCACAAGATTACTCCTTTCGTGCAGGGACTGTTGCTGCCGCTTAA 465 0.4065 MTDSSKRHCLLEEDNGLAFIADTDGGLKGHYPYHYQHGFVSRTLGYAYPISSLRSARFYDARFEDHIPHFLQACFLCKKPLGNNRDIFMYRGDTPFCSDDCRQEQIEMDEAKEKNKNLSSMKALRKKEKNKSIKSASPNKSQDYSFRAGTVAAA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1258 154 ProSiteProfiles Zinc finger FLZ-type profile. 69 113 IPR007650 -
Lal23g1258 154 MobiDBLite consensus disorder prediction 110 154 - -
Lal23g1258 154 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 47 154 IPR044533 -
Lal23g1258 154 Coils Coil 101 131 - -
Lal23g1258 154 Pfam zinc-finger of the FCS-type, C2-C2 61 112 IPR007650 -
Lal23g1258 154 PANTHER - 47 154 - -
Lal23g1258 154 MobiDBLite consensus disorder prediction 110 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1258 Lal-Chr23 13700331 13701870 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1258 - - gmx:100797178 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1258 23 13700331 13701870 Lal23g1258 23 13700331 13701870 ECH
Lal15g0836 15 6244505 6246260 Lal23g1258 23 13700331 13701870 LSH
Lal15g0836 15 6244505 6246260 Lal23g1258 23 13700331 13701870 PCT
Lal23g0764 23 10216514 10218153 Lal23g1258 23 13700331 13701870 PCT